Transcript: ENSDART00000147892.2 wdr3-205

Description

WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9830]

Location

Chromosome 9: 20,869,166-20,872,565 forward strand.

About this transcript

This transcript has 4 exons, is associated with 197 variant alleles and maps to 123 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000011079.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000003648.10	wdr3-201	3058	938aa	ENSDARP00000023281.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147892.2	wdr3-205	401	61aa	ENSDARP00000116100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000131713.2	wdr3-202	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000145259.3	wdr3-204	813	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000142280.2	wdr3-203	734	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 401 bps, Translation length: 61 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000147892.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000147892.2 wdr3-205

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000147892.2 wdr3-205

Summary

About Us

Get help

Our sister sites

Follow us