Transcript: ENSDART00000148749.2 aatf-202

Description

apoptosis antagonizing transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-9654]

Location

Chromosome 5: 56,277,879-56,280,674 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 9 domains and features, is associated with 80 variant alleles and maps to 38 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000025467.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000028854.10	aatf-201	1969	569aa	ENSDARP00000031013.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R1W8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000170610.2	aatf-204	2327	568aa	ENSDARP00000132843.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IHH9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000148749.2	aatf-202	654	210aa	ENSDARP00000124013.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000150057.2	aatf-203	687	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 654 bps, Translation length: 210 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000148749.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000148749.2 aatf-202

Summary

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Transcript: ENSDART00000148749.2 aatf-202

Summary

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