Transcript: ENSDART00000168372.2 lsm4-202

Description

LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]

Location

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 262 variant alleles and maps to 171 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000037824.8	lsm4-201	832	143aa	ENSDARP00000037344.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P6E4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000168372.2	lsm4-202	733	129aa	ENSDARP00000135315.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 733 bps, Translation length: 129 residues

Version

ENSDART00000168372.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.