Transcript: ENSDART00000174304.2 plxdc2b-203

Description

plexin domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-140106-69]

Location

About this transcript

This transcript has 2 exons, is associated with 5 variant alleles and maps to 8 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000083929.6	plxdc2b-201	4579	525aa	ENSDARP00000078364.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C0SQ73	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000174144.2	plxdc2b-202	849	238aa	ENSDARP00000143035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000174304.2	plxdc2b-203	552	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 552 bps,

Version

ENSDART00000174304.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.