Transcript: ENSMUST00000056589.15 Selenov-201

Description

selenoprotein V [Source:MGI Symbol;Acc:MGI:3608324]

Gene Synonyms

BC089491

Location

Chromosome 7: 27,984,077-27,990,611 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 15 domains and features, is associated with 1016 variant alleles and maps to 180 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000046750.19 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000056589.15	Selenov-201	1267	328aa	ENSMUSP00000050372.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS39855	D3YXG1 Q5FWB9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000156408.2	Selenov-202	383	46aa	ENSMUSP00000115405.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6TYD6	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,267 bps, Translation length: 328 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS39855

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000056589.15

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

NMD exception [Definitions]

selenocysteine

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000056589.15 Selenov-201

Summary

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Transcript: ENSMUST00000056589.15 Selenov-201

Summary

About Us

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