Transcript: ENSRNOT00000023661.6 Ppargc1b-201

Description

PPARG coactivator 1 beta [Source:RGD Symbol;Acc:727948]

Gene Synonyms

PGC1beta, Perc

Location

About this transcript

This transcript has 12 exons, is annotated with 39 domains and features, is associated with 357 variant alleles and maps to 194 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000066048.4	Ppargc1b-202	3256	1026aa	ENSRNOP00000058932.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q811R2-2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000023661.6	Ppargc1b-201	3332	1010aa	ENSRNOP00000023661.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q811R2-1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 3,332 bps, Translation length: 1,010 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q811R2

Version

ENSRNOT00000023661.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.