Transcript: ENSRNOT00000095508.1 Sorl1-201

Description

sortilin related receptor 1 [Source:RGD Symbol;Acc:619914]

Gene Synonyms

LOC102547257, LOC300652, Lr11, RGD619914, SorLA

Location

About this transcript

This transcript has 48 exons, is annotated with 131 domains and features, is associated with 549 variant alleles and maps to 529 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000095508.1	Sorl1-201	10822	2215aa	ENSRNOP00000089955.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P0DSP1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000096310.1	Sorl1-202	10813	2212aa	ENSRNOP00000081995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZUZ4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 48, Coding exons: 48, Transcript length: 10,822 bps, Translation length: 2,215 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P0DSP1

Version

ENSRNOT00000095508.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.