Transcript: ENSRNOT00000109909.1 Gldn-202

Description

gliomedin [Source:RGD Symbol;Acc:727879]

Gene Synonyms

Colm, Crgl2

Location

About this transcript

This transcript has 9 exons, is annotated with 20 domains and features, is associated with 272 variant alleles and maps to 115 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000109909.1	Gldn-202	2386	550aa	ENSRNOP00000093645.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AJB1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000033900.3	Gldn-201	2383	549aa	ENSRNOP00000029833.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V8X4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,386 bps, Translation length: 550 residues

Version

ENSRNOT00000109909.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.