Transcript: ENST00000444549.2 LY6G5B-215

Description

lymphocyte antigen 6 family member G5B [Source:HGNC Symbol;Acc:HGNC:13931]

Gene Synonyms

C6ORF19, G5B

Location

Scaffold HSCHR6_MHC_COX_CTG1: 3,147,670-3,150,837 forward strand.

About this transcript

This transcript has 2 exons, is associated with 2092 variant alleles and maps to 933 oligo probes.

Gene

This transcript is a product of gene ENSG00000241713.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000455499.5	LY6G5B-216	1903	212aa	ENSP00000407899.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140T9M8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000480530.1	LY6G5B-217	1870	201aa	ENSP00000417822.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8NDX9-1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000444549.2	LY6G5B-215	2589	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,589 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000444549.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000444549.2 LY6G5B-215

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Transcript: ENST00000444549.2 LY6G5B-215

Summary

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