Transcript: ENST00000456439.5 LY6G5B-205

Description

lymphocyte antigen 6 family member G5B [Source:HGNC Symbol;Acc:HGNC:13931]

Gene Synonyms

C6ORF19, G5B

Location

Scaffold HSCHR6_MHC_SSTO_CTG1: 2,968,402-2,972,830 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 2880 variant alleles and maps to 886 oligo probes.

Gene

This transcript is a product of gene ENSG00000239497.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000456439.5	LY6G5B-205	1903	212aa	ENSP00000395699.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140T990	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000490011.1	LY6G5B-206	1870	201aa	ENSP00000418217.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1U9X7Y5 Q8NDX9	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000423363.2	LY6G5B-204	2589	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,903 bps, Translation length: 212 residues

Transcript Support Level (TSL)

TSL:3

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000456439.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000456439.5 LY6G5B-205

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000456439.5 LY6G5B-205

Summary

About Us

Get help

Our sister sites

Follow us