Transcript: ENST00000493739.2 SPART-AS1-203

Description

SPART antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:39933]

Gene Synonyms

C13ORF43, SPG20-AS1, SPG20OS

Location

Chromosome 13: 36,346,432-36,369,525 forward strand.

About this transcript

This transcript has 6 exons, is associated with 9290 variant alleles and maps to 248 oligo probes.

Gene

This transcript is a product of gene ENSG00000120664.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000488319.5	SPART-AS1-202	556	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000655398.1	SPART-AS1-204	4538	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493739.2	SPART-AS1-203	566	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000379848.5	SPART-AS1-201	508	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 566 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000493739.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000493739.2 SPART-AS1-203

Summary

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Transcript: ENST00000493739.2 SPART-AS1-203

Summary

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