Transcript: ENST00000611161.2 LENG9-203

Description

leukocyte receptor cluster member 9 [Source:HGNC Symbol;Acc:HGNC:16306]

Location

Chromosome 19: 54,461,732-54,463,778 reverse strand.

About this transcript

This transcript has 1 exon, is annotated with 15 domains and features, is associated with 1855 variant alleles and maps to 200 oligo probes.

Gene

This transcript is a product of gene ENSG00000275183.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000611161.2	LENG9-203	2047	478aa	ENSP00000479355.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS77358	A0A087WVD1	NM_001301782.2	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 2,047 bps, Translation length: 478 residues

MANE

This MANE Select transcript contains ENSP00000479355 and matches to NM_001301782.2 and NP_001288711.1

CCDS

This transcript is a member of the Human CCDS set: CCDS77358

Transcript Support Level (TSL)

TSL:NA

Version

ENST00000611161.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000611161.2 LENG9-203

Summary

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Transcript: ENST00000611161.2 LENG9-203

Summary

About Us

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