Transcript: ENST00000632907.1 GOLGA6L9-206

Description

golgin A6 family like 9 [Source:HGNC Symbol;Acc:HGNC:37229]

Gene Synonyms

GOLGA6L20

Location

Scaffold HSCHR15_5_CTG8: 219,130-228,233 forward strand.

About this transcript

This transcript has 6 exons, is associated with 6398 variant alleles and maps to 2909 oligo probes.

Gene

This transcript is a product of gene ENSG00000274320.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000620574.2	GOLGA6L9-204	1710	432aa	ENSP00000479589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6NEM1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000632907.1	GOLGA6L9-206	6545	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000632461.1	GOLGA6L9-205	534	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 6,545 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000632907.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000632907.1 GOLGA6L9-206

Summary

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Transcript: ENST00000632907.1 GOLGA6L9-206

Summary

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