Transcript: ENST00000633909.1 TRPV5-206

Description

transient receptor potential cation channel subfamily V member 5 [Source:HGNC Symbol;Acc:HGNC:3145]

Gene Synonyms

CAT2, ECAC1

Location

Scaffold HSCHR7_2_CTG6: 931,581-956,508 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 36 domains and features, is associated with 15869 variant alleles and maps to 429 oligo probes.

Gene

This transcript is a product of gene ENSG00000274348.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000621710.2	TRPV5-204	2952	729aa	ENSP00000483049.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0A6YY98	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000633067.1	TRPV5-205	2120	381aa	ENSP00000488418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0J9YXI7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000633909.1	TRPV5-206	2025	674aa	ENSP00000488246.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H7C2J6	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,025 bps, Translation length: 674 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000633909.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

dotter confirmed [Definitions]

not organism-supported

Transcript: ENST00000633909.1 TRPV5-206

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Transcript: ENST00000633909.1 TRPV5-206

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