Transcript: ENST00000641420.1 IGHE-202

Description

immunoglobulin heavy constant epsilon [Source:HGNC Symbol;Acc:HGNC:5522]

Location

Chromosome 14: 105,597,691-105,601,728 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 1 domain and feature, is associated with 2569 variant alleles and maps to 555 oligo probes.

Gene

This transcript is a product of gene ENSG00000211891.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000641420.1	IGHE-202	1485	494aa	ENSP00000492979.1	Constant chain immunoglobulin gene that undergoes somatic recombination before transcriptionIG C gene		P01854-3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000390541.2	IGHE-201	1412	428aa	ENSP00000374983.2	Constant chain immunoglobulin gene that undergoes somatic recombination before transcriptionIG C gene		P01854-1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,485 bps, Translation length: 494 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P01854

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000641420.1

Type

IG C gene

Annotation Method

Immunoglobulin (Ig) and T-cell receptor (TcR) annotation imported from the manually curated IG gene set from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000641420.1 IGHE-202

Summary

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Transcript: ENST00000641420.1 IGHE-202

Summary

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