Transcript: ENST00000643490.2 POLR2A-211

Description

RNA polymerase II subunit A [Source:HGNC Symbol;Acc:HGNC:9187]

Gene Synonyms

POLR2, POLRA, RPB1

Location

About this transcript

This transcript has 29 exons, is annotated with 102 domains and features and maps to 874 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000643490.2	POLR2A-211	6749	1970aa	ENSP00000494840.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		NM_000937.5	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000710438.1	POLR2A-212	2085	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 29, Coding exons: 29, Transcript length: 6,749 bps, Translation length: 1,970 residues

MANE

This MANE Select transcript contains ENSP00000494840 and matches to NM_000937.5 and NP_000928.1

Version

ENST00000643490.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.