Transcript: ENST00000646498.1 CACNA2D4-247

Description

calcium voltage-gated channel auxiliary subunit alpha2delta 4 [Source:HGNC Symbol;Acc:HGNC:20202]

Gene Synonyms

ALPHA2DELTA-4

Location

Scaffold HG1815_PATCH: 134,946-153,882 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 1 domain and feature, is associated with 12684 variant alleles and maps to 395 oligo probes.

Gene

This transcript is a product of gene ENSG00000284953.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000644981.1	CACNA2D4-237	3499	1154aa	ENSP00000494395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7Z3S7-5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000645018.2	CACNA2D4-238	5285	1137aa	ENSP00000495256.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7Z3S7-1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000644394.1	CACNA2D4-234	3883	1112aa	ENSP00000494474.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000645225.1	CACNA2D4-241	3311	1073aa	ENSP00000493490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7Z3S7-4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000642910.1	CACNA2D4-229	3273	1090aa	ENSP00000494565.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7Z3S7-6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000647100.1	CACNA2D4-250	2566	780aa	ENSP00000496164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000644401.1	CACNA2D4-235	1498	267aa	ENSP00000496774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000642731.1	CACNA2D4-228	952	282aa	ENSP00000494302.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000643563.1	CACNA2D4-231	895	284aa	ENSP00000496204.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000646018.1	CACNA2D4-245	4450	601aa	ENSP00000494451.1	Nonsense mediated decay	-	-	-
ENST00000646946.1	CACNA2D4-248	2876	192aa	ENSP00000493870.1	Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000646498.1	CACNA2D4-247	1615	41aa	ENSP00000494913.1	Nonsense mediated decay	Q7Z3S7-7	-	-
ENST00000642253.1	CACNA2D4-227	976	56aa	ENSP00000493907.1	Nonsense mediated decay	-	-	-
ENST00000647066.1	CACNA2D4-249	556	56aa	ENSP00000495851.1	Nonsense mediated decay	-	-	-
ENST00000645209.1	CACNA2D4-240	499	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000645049.1	CACNA2D4-239	5936	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000645267.1	CACNA2D4-242	680	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000645926.1	CACNA2D4-244	676	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000644558.1	CACNA2D4-236	596	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000647253.1	CACNA2D4-251	576	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000646095.1	CACNA2D4-246	575	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000647339.1	CACNA2D4-252	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000643629.1	CACNA2D4-232	552	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000644272.1	CACNA2D4-233	550	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000642921.1	CACNA2D4-230	498	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000645737.1	CACNA2D4-243	404	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 10, Coding exons: 3, Transcript length: 1,615 bps, Translation length: 41 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7Z3S7

Version

ENST00000646498.1

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

non canonical U12 [Definitions]

Transcript: ENST00000646498.1 CACNA2D4-247

Summary

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Transcript: ENST00000646498.1 CACNA2D4-247

Summary

About Us

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