Transcript: ENST00000669597.1 RNF139-DT-204

Description

RNF139 divergent transcript [Source:HGNC Symbol;Acc:HGNC:48940]

Gene Synonyms

RNF139-AS1

Location

Chromosome 8: 124,464,307-124,474,582 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 3804 variant alleles and maps to 204 oligo probes.

Gene

This transcript is a product of gene ENSG00000245149.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000499418.2	RNF139-DT-201	5654	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000669597.1	RNF139-DT-204	3850	No protein	-	lncRNA	-	-
ENST00000530778.2	RNF139-DT-203	1779	No protein	-	lncRNA	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000690375.1	RNF139-DT-205	1582	No protein	-	lncRNA	-	-
ENST00000693326.1	RNF139-DT-206	673	No protein	-	lncRNA	-	-
ENST00000519861.2	RNF139-DT-202	569	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 3,850 bps,

Version

ENST00000669597.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000669597.1 RNF139-DT-204

Summary

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Transcript: ENST00000669597.1 RNF139-DT-204

Summary

About Us

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