Transcript: ENST00000672150.1 YBX2-210

Description

Y-box binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17948]

Gene Synonyms

CONTRIN, CSDA3, MSY2

Location

Scaffold HG2087_PATCH: 43,591-49,967 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 30 domains and features, is associated with 4034 variant alleles and maps to 387 oligo probes.

Gene

This transcript is a product of gene ENSG00000288504.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000672150.1	YBX2-210	1654	364aa	ENSP00000499890.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384MDP4 Q9Y2T7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000671716.1	YBX2-208	640	164aa	ENSP00000500181.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000672563.1	YBX2-212	653	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000671897.1	YBX2-209	4553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000672514.1	YBX2-211	2195	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000672691.1	YBX2-213	791	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000673197.1	YBX2-214	606	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,654 bps, Translation length: 364 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y2T7

Version

ENST00000672150.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article. This was projected to the alternate locus via a mapping from the primary assembly.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000672150.1 YBX2-210

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Transcript: ENST00000672150.1 YBX2-210

Summary

About Us

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