Transcript: ENST00000672514.1 YBX2-211

Description

Y-box binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17948]

Gene Synonyms

CONTRIN, CSDA3, MSY2

Location

Scaffold HG2087_PATCH: 43,591-49,263 reverse strand.

About this transcript

This transcript has 8 exons and maps to 316 oligo probes.

Gene

This transcript is a product of gene ENSG00000288504.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000672150.1	YBX2-210	1654	364aa	ENSP00000499890.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384MDP4 Q9Y2T7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000671716.1	YBX2-208	640	164aa	ENSP00000500181.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000672563.1	YBX2-212	653	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000671897.1	YBX2-209	4553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000672514.1	YBX2-211	2195	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000672691.1	YBX2-213	791	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000673197.1	YBX2-214	606	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 8, Coding exons: 0, Transcript length: 2,195 bps,

Version

ENST00000672514.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project, projected to the alternate locus via a mapping from the primary assembly.

Transcript: ENST00000672514.1 YBX2-211

Summary

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Transcript: ENST00000672514.1 YBX2-211

Summary

About Us

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