Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
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Transcript: FBtr0084541 SMC1-RA

Description

Structural maintenance of chromosomes 1

Gene Synonyms

SMC1

Location

About this transcript

This transcript has 11 exons, is annotated with 29 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0084541	SMC1-RA	3924	1238aa	FBpp0083926	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6UXV6 B6UXV9 B6UXW2 B6UXW7 B6UXW9 B6UXX0 B6UXX3 B6UXX7 Q9N6I4 Q9VCD8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 3,924 bps, Translation length: 1,238 residues

Version

FBtr0084541

Type

Protein coding

Annotation Method

Feature imported from FlyBase.