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Series GSE130119 Query DataSets for GSE130119
Status Public on Feb 12, 2020
Title MAFG-driven astrocytes promote CNS inflammation
Organisms Homo sapiens; Mus musculus
Experiment type Methylation profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 32051591
Submission date Apr 22, 2019
Last update date Feb 28, 2020
Contact name Michael Wheeler
E-mail(s) mwheeler0@bwh.harvard.edu
Organization name Brigham and Women's Hospital
Department Neurology
Street address 60 Fenwood Rd.
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (5)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (163)
GSM3716987 WT-1 [S1]
GSM3716988 WT-2 [Sample8]
GSM3716989 WT-3 [S2]
This SuperSeries is composed of the following SubSeries:
GSE129606 Genome-wide analysis of DNA methylation profile in astrocytes isolated from naïve mice or EAE mice transduced with astrocyte-specific Mafg-targeting or non-targeting lentiviruses [WGBS]
GSE129607 Genome-wide analysis of MAFG binding in astrocytes during EAE [ChIP-seq]
GSE129608 Genome-wide analysis of chromatin profile in astrocytes isolated from EAE mice transduced with astrocyte-specific Mafg-targeting or non-targeting lentiviruses [ATAC-seq]
Relations
BioProject PRJNA534022

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE130119_RAW.tar 390.0 Mb (http)(custom) TAR (of BEDGRAPH, CSV, TXT)
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