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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2017-03-21 06:03:46 UTC
Update Date2021-09-14 15:48:27 UTC
HMDB IDHMDB0062360
Secondary Accession Numbers
  • HMDB62360
Metabolite Identification
Common Name(6E,8E,10S,12Z)-10-Hydroxy-3-oxooctadecatrienoyl-CoA
Description(6E,8E,10S,12Z)-10-Hydroxy-3-oxooctadecatrienoyl-CoA, also known as 3-oxo-10(S)-hydroxy-octadeca-6E,8E,12Z-trienoyl-CoA, belongs to the class of organic compounds known as long-chain 3-oxoacyl CoAs. These are organic compounds containing a coenzyme A derivative which has a 3-oxo acylated long aliphatic chain of 13 to 21 carbon atoms. (6E,8E,10S,12Z)-10-Hydroxy-3-oxooctadecatrienoyl-CoA is considered to be a practically insoluble (in water) and relatively neutral molecule.
Structure
Thumb
Synonyms
ValueSource
(6E,8E,10S,12Z)-10-Hydroxy-3-oxooctadecatrienoyl-coenzyme AHMDB
(6E,8E,10S,12Z)-10-Hydroxy-3-oxooctadeca-6,8,12-trienoyl-CoAHMDB
(6E,8E,10S,12Z)-10-Hydroxy-3-oxooctadeca-6,8,12-trienoyl-coenzyme AHMDB
10S-Hydroxy-3-oxooctadeca-6E,8E,12Z-trienoyl-CoAHMDB
10S-Hydroxy-3-oxooctadeca-6E,8E,12Z-trienoyl-coenzyme AHMDB
3-oxo-10(S)-Hydroxy-octadeca-6E,8E,12Z-trienoyl-CoAHMDB
3-oxo-10(S)-Hydroxy-octadeca-6E,8E,12Z-trienoyl-coenzyme AHMDB
3-oxo-10(S)-Hydroxyoctadeca-6E,8E,12Z-trienoyl-CoAHMDB
3-oxo-10(S)-Hydroxyoctadeca-6E,8E,12Z-trienoyl-coenzyme AHMDB
Chemical FormulaC39H62N7O19P3S
Average Molecular Weight1057.94
Monoisotopic Molecular Weight1057.303404972
IUPAC Name{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-2-({[hydroxy({hydroxy[(3R)-3-hydroxy-3-({2-[(2-{[(6E,8E,10S,12Z)-10-hydroxy-3-oxooctadeca-6,8,12-trienoyl]sulfanyl}ethyl)carbamoyl]ethyl}carbamoyl)-2,2-dimethylpropoxy]phosphoryl}oxy)phosphoryl]oxy}methyl)oxolan-3-yl]oxy}phosphonic acid
Traditional Name[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-hydroxy-2-({[hydroxy([hydroxy((3R)-3-hydroxy-3-({2-[(2-{[(6E,8E,10S,12Z)-10-hydroxy-3-oxooctadeca-6,8,12-trienoyl]sulfanyl}ethyl)carbamoyl]ethyl}carbamoyl)-2,2-dimethylpropoxy)phosphoryl]oxy)phosphoryl]oxy}methyl)oxolan-3-yl]oxyphosphonic acid
CAS Registry NumberNot Available
SMILES
CCCCC\C=C/C[C@H](O)\C=C\C=C\CCC(=O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP(O)(=O)OP(O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP(O)(O)=O)N1C=NC2=C1N=CN=C2N
InChI Identifier
InChI=1S/C39H62N7O19P3S/c1-4-5-6-7-8-11-14-26(47)15-12-9-10-13-16-27(48)21-30(50)69-20-19-41-29(49)17-18-42-37(53)34(52)39(2,3)23-62-68(59,60)65-67(57,58)61-22-28-33(64-66(54,55)56)32(51)38(63-28)46-25-45-31-35(40)43-24-44-36(31)46/h8-12,15,24-26,28,32-34,38,47,51-52H,4-7,13-14,16-23H2,1-3H3,(H,41,49)(H,42,53)(H,57,58)(H,59,60)(H2,40,43,44)(H2,54,55,56)/b10-9+,11-8-,15-12+/t26-,28+,32+,33+,34-,38+/m0/s1
InChI KeySVVDPRGQCCIAMF-VGUUDYGZSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as long-chain 3-oxoacyl coas. These are organic compounds containing a coenzyme A derivative, which is 3-oxo acylated long aliphatic chain of 13 to 21 carbon atoms.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassFatty Acyls
Sub ClassFatty acyl thioesters
Direct ParentLong-chain 3-oxoacyl CoAs
Alternative Parents
Substituents
  • Coenzyme a or derivatives
  • Purine ribonucleoside diphosphate
  • Purine ribonucleoside bisphosphate
  • Purine ribonucleoside 3',5'-bisphosphate
  • Ribonucleoside 3'-phosphate
  • Pentose-5-phosphate
  • Pentose phosphate
  • N-glycosyl compound
  • Glycosyl compound
  • Pentose monosaccharide
  • Organic pyrophosphate
  • Monosaccharide phosphate
  • 6-aminopurine
  • Purine
  • Imidazopyrimidine
  • Monoalkyl phosphate
  • Aminopyrimidine
  • Imidolactam
  • Alkyl phosphate
  • 1,3-dicarbonyl compound
  • Pyrimidine
  • Phosphoric acid ester
  • Organic phosphoric acid derivative
  • N-substituted imidazole
  • Monosaccharide
  • Heteroaromatic compound
  • Tetrahydrofuran
  • Imidazole
  • Azole
  • Carbothioic s-ester
  • Thiocarboxylic acid ester
  • Secondary alcohol
  • Ketone
  • Amino acid or derivatives
  • Oxacycle
  • Azacycle
  • Organoheterocyclic compound
  • Organic 1,3-dipolar compound
  • Propargyl-type 1,3-dipolar organic compound
  • Sulfenyl compound
  • Thiocarboxylic acid or derivatives
  • Carboxylic acid derivative
  • Carboximidic acid derivative
  • Carboximidic acid
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Primary amine
  • Organosulfur compound
  • Organooxygen compound
  • Organonitrogen compound
  • Carbonyl group
  • Amine
  • Alcohol
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility15 g/lALOGPS
LogP-0.04ALOGPS
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+273.1930932474
DeepCCS[M-H]-271.10230932474
DeepCCS[M-2H]-307.10430932474
DeepCCS[M+Na]+281.62630932474

Predicted Kovats Retention Indices

Not Available
Spectra
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID74857877
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound134819279
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available