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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2017-03-23 06:20:47 UTC
Update Date2022-03-07 03:18:00 UTC
HMDB IDHMDB0062801
Secondary Accession Numbers
  • HMDB62801
Metabolite Identification
Common NameSulfoglycolithocholate(2-)
Description2-({4-[2,15-dimethyl-5-(sulfooxy)tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-14-yl]-1-hydroxypentylidene}amino)acetic acid belongs to the class of organic compounds known as glycinated bile acids and derivatives. Glycinated bile acids and derivatives are compounds with a structure characterized by the presence of a glycine linked to a bile acid skeleton. 2-({4-[2,15-dimethyl-5-(sulfooxy)tetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-14-yl]-1-hydroxypentylidene}amino)acetic acid is a moderately basic compound (based on its pKa).
Structure
Data?1563866362
Synonyms
ValueSource
2-({4-[2,15-dimethyl-5-(sulfooxy)tetracyclo[8.7.0.0,.0,]heptadecan-14-yl]-1-hydroxypentylidene}amino)acetateGenerator
2-({4-[2,15-dimethyl-5-(sulphooxy)tetracyclo[8.7.0.0,.0,]heptadecan-14-yl]-1-hydroxypentylidene}amino)acetateGenerator
2-({4-[2,15-dimethyl-5-(sulphooxy)tetracyclo[8.7.0.0,.0,]heptadecan-14-yl]-1-hydroxypentylidene}amino)acetic acidGenerator
Sulfoglycolithocholic acid(2-)Generator
Sulphoglycolithocholate(2-)Generator
Sulphoglycolithocholic acid(2-)Generator
Glycolithocholate sulfateHMDB
Glycolithocholate sulphateHMDB
Glycolithocholic acid sulfateHMDB
Glycolithocholic acid sulfuric acidHMDB
Glycolithocholic acid sulphuric acidHMDB
SulfoglycolithocholateHMDB
Sulfoglycolithocholic acidHMDB
SulfolithocholylglycineHMDB
SulfolithoglycocholineHMDB
SulphoglycolithocholateHMDB
Sulphoglycolithocholic acidHMDB
Chemical FormulaC26H43NO7S
Average Molecular Weight513.69
Monoisotopic Molecular Weight513.276023903
IUPAC Name2-({4-[2,15-dimethyl-5-(sulfooxy)tetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl]-1-hydroxypentylidene}amino)acetic acid
Traditional Name({4-[2,15-dimethyl-5-(sulfooxy)tetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl]-1-hydroxypentylidene}amino)acetic acid
CAS Registry NumberNot Available
SMILES
CC(CCC(O)=NCC(O)=O)C1CCC2C3CCC4CC(CCC4(C)C3CCC12C)OS(O)(=O)=O
InChI Identifier
InChI=1S/C26H43NO7S/c1-16(4-9-23(28)27-15-24(29)30)20-7-8-21-19-6-5-17-14-18(34-35(31,32)33)10-12-25(17,2)22(19)11-13-26(20,21)3/h16-22H,4-15H2,1-3H3,(H,27,28)(H,29,30)(H,31,32,33)
InChI KeyFHXBAFXQVZOILS-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as glycinated bile acids and derivatives. Glycinated bile acids and derivatives are compounds with a structure characterized by the presence of a glycine linked to a bile acid skeleton.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassSteroids and steroid derivatives
Sub ClassBile acids, alcohols and derivatives
Direct ParentGlycinated bile acids and derivatives
Alternative Parents
Substituents
  • Glycinated bile acid
  • Sulfated steroid skeleton
  • N-acyl-alpha-amino acid
  • N-acyl-alpha amino acid or derivatives
  • Alpha-amino acid or derivatives
  • Fatty amide
  • N-acyl-amine
  • Fatty acyl
  • Sulfuric acid monoester
  • Sulfate-ester
  • Alkyl sulfate
  • Sulfuric acid ester
  • Organic sulfuric acid or derivatives
  • Secondary carboxylic acid amide
  • Carboxamide group
  • Monocarboxylic acid or derivatives
  • Carboxylic acid derivative
  • Carboxylic acid
  • Organonitrogen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organooxygen compound
  • Carbonyl group
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Not AvailableNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility0.00014 g/lALOGPS
LogP2.96ALOGPS
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP1.27ALOGPS
logP3.38ChemAxon
logS-5.7ALOGPS
pKa (Strongest Acidic)-1.3ChemAxon
pKa (Strongest Basic)2.05ChemAxon
Physiological Charge-2ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area133.49 ŲChemAxon
Rotatable Bond Count8ChemAxon
Refractivity131 m³·mol⁻¹ChemAxon
Polarizability56.81 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M-2H]-250.38530932474
DeepCCS[M+Na]+225.61330932474
AllCCS[M+H]+221.132859911
AllCCS[M+H-H2O]+219.732859911
AllCCS[M+NH4]+222.332859911
AllCCS[M+Na]+222.732859911
AllCCS[M-H]-212.532859911
AllCCS[M+Na-2H]-215.032859911
AllCCS[M+HCOO]-218.032859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Sulfoglycolithocholate(2-)CC(CCC(O)=NCC(O)=O)C1CCC2C3CCC4CC(CCC4(C)C3CCC12C)OS(O)(=O)=O4561.1Standard polar33892256
Sulfoglycolithocholate(2-)CC(CCC(O)=NCC(O)=O)C1CCC2C3CCC4CC(CCC4(C)C3CCC12C)OS(O)(=O)=O3227.4Standard non polar33892256
Sulfoglycolithocholate(2-)CC(CCC(O)=NCC(O)=O)C1CCC2C3CCC4CC(CCC4(C)C3CCC12C)OS(O)(=O)=O4132.6Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Sulfoglycolithocholate(2-),1TMS,isomer #1CC(CCC(=NCC(=O)O)O[Si](C)(C)C)C1CCC2C3CCC4CC(OS(=O)(=O)O)CCC4(C)C3CCC12C4327.3Semi standard non polar33892256
Sulfoglycolithocholate(2-),1TMS,isomer #2CC(CCC(O)=NCC(=O)O[Si](C)(C)C)C1CCC2C3CCC4CC(OS(=O)(=O)O)CCC4(C)C3CCC12C4248.6Semi standard non polar33892256
Sulfoglycolithocholate(2-),1TMS,isomer #3CC(CCC(O)=NCC(=O)O)C1CCC2C3CCC4CC(OS(=O)(=O)O[Si](C)(C)C)CCC4(C)C3CCC12C4271.2Semi standard non polar33892256
Sulfoglycolithocholate(2-),2TMS,isomer #1CC(CCC(=NCC(=O)O[Si](C)(C)C)O[Si](C)(C)C)C1CCC2C3CCC4CC(OS(=O)(=O)O)CCC4(C)C3CCC12C4239.2Semi standard non polar33892256
Sulfoglycolithocholate(2-),2TMS,isomer #2CC(CCC(=NCC(=O)O)O[Si](C)(C)C)C1CCC2C3CCC4CC(OS(=O)(=O)O[Si](C)(C)C)CCC4(C)C3CCC12C4282.2Semi standard non polar33892256
Sulfoglycolithocholate(2-),2TMS,isomer #3CC(CCC(O)=NCC(=O)O[Si](C)(C)C)C1CCC2C3CCC4CC(OS(=O)(=O)O[Si](C)(C)C)CCC4(C)C3CCC12C4171.0Semi standard non polar33892256
Sulfoglycolithocholate(2-),3TMS,isomer #1CC(CCC(=NCC(=O)O[Si](C)(C)C)O[Si](C)(C)C)C1CCC2C3CCC4CC(OS(=O)(=O)O[Si](C)(C)C)CCC4(C)C3CCC12C4175.6Semi standard non polar33892256
Sulfoglycolithocholate(2-),3TMS,isomer #1CC(CCC(=NCC(=O)O[Si](C)(C)C)O[Si](C)(C)C)C1CCC2C3CCC4CC(OS(=O)(=O)O[Si](C)(C)C)CCC4(C)C3CCC12C4326.0Standard non polar33892256
Sulfoglycolithocholate(2-),3TMS,isomer #1CC(CCC(=NCC(=O)O[Si](C)(C)C)O[Si](C)(C)C)C1CCC2C3CCC4CC(OS(=O)(=O)O[Si](C)(C)C)CCC4(C)C3CCC12C4977.8Standard polar33892256
Sulfoglycolithocholate(2-),1TBDMS,isomer #1CC(CCC(=NCC(=O)O)O[Si](C)(C)C(C)(C)C)C1CCC2C3CCC4CC(OS(=O)(=O)O)CCC4(C)C3CCC12C4546.9Semi standard non polar33892256
Sulfoglycolithocholate(2-),1TBDMS,isomer #2CC(CCC(O)=NCC(=O)O[Si](C)(C)C(C)(C)C)C1CCC2C3CCC4CC(OS(=O)(=O)O)CCC4(C)C3CCC12C4502.1Semi standard non polar33892256
Sulfoglycolithocholate(2-),1TBDMS,isomer #3CC(CCC(O)=NCC(=O)O)C1CCC2C3CCC4CC(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)CCC4(C)C3CCC12C4467.3Semi standard non polar33892256
Sulfoglycolithocholate(2-),2TBDMS,isomer #1CC(CCC(=NCC(=O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C1CCC2C3CCC4CC(OS(=O)(=O)O)CCC4(C)C3CCC12C4709.5Semi standard non polar33892256
Sulfoglycolithocholate(2-),2TBDMS,isomer #2CC(CCC(=NCC(=O)O)O[Si](C)(C)C(C)(C)C)C1CCC2C3CCC4CC(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)CCC4(C)C3CCC12C4699.5Semi standard non polar33892256
Sulfoglycolithocholate(2-),2TBDMS,isomer #3CC(CCC(O)=NCC(=O)O[Si](C)(C)C(C)(C)C)C1CCC2C3CCC4CC(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)CCC4(C)C3CCC12C4636.5Semi standard non polar33892256
Sulfoglycolithocholate(2-),3TBDMS,isomer #1CC(CCC(=NCC(=O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C1CCC2C3CCC4CC(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)CCC4(C)C3CCC12C4779.9Semi standard non polar33892256
Sulfoglycolithocholate(2-),3TBDMS,isomer #1CC(CCC(=NCC(=O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C1CCC2C3CCC4CC(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)CCC4(C)C3CCC12C5131.1Standard non polar33892256
Sulfoglycolithocholate(2-),3TBDMS,isomer #1CC(CCC(=NCC(=O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C1CCC2C3CCC4CC(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)CCC4(C)C3CCC12C5061.5Standard polar33892256
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sulfoglycolithocholate(2-) 10V, Positive-QTOFsplash10-00di-9000520000-2c7ae85d51f5f825d0902019-02-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sulfoglycolithocholate(2-) 20V, Positive-QTOFsplash10-00di-9001100000-1cfb12f5e6643e864fcc2019-02-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sulfoglycolithocholate(2-) 40V, Positive-QTOFsplash10-00di-9001000000-37f2e1a2156b375d74ba2019-02-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sulfoglycolithocholate(2-) 10V, Negative-QTOFsplash10-03di-1000790000-f2ca4ebdea692cf140232019-02-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sulfoglycolithocholate(2-) 20V, Negative-QTOFsplash10-03l0-3002910000-1f1cfdc4b068ba2257ab2019-02-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sulfoglycolithocholate(2-) 40V, Negative-QTOFsplash10-00di-9102100000-89110ee08192d88c32252019-02-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sulfoglycolithocholate(2-) 10V, Negative-QTOFsplash10-03di-0000290000-8ef6c0ecd37f4fb5396b2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sulfoglycolithocholate(2-) 20V, Negative-QTOFsplash10-022m-9002830000-6fe19eeb75af25c519db2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sulfoglycolithocholate(2-) 40V, Negative-QTOFsplash10-0a4i-9000100000-bddef81037faedd138472021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sulfoglycolithocholate(2-) 10V, Positive-QTOFsplash10-01ot-0002930000-f0d9b39e869f8b61cc0f2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sulfoglycolithocholate(2-) 20V, Positive-QTOFsplash10-0002-1039200000-8cd7871a612e6b5495a82021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Sulfoglycolithocholate(2-) 40V, Positive-QTOFsplash10-08mr-4369100000-942ad4f05c97d7d94d402021-09-23Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound3623888
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.