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Tmed10-ps transmembrane p24 trafficking protein 10, pseudogene [ Mus musculus (house mouse) ]

Gene ID: 100042773, updated on 8-Feb-2024

Summary

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Official Symbol
Tmed10-psprovided by MGI
Official Full Name
transmembrane p24 trafficking protein 10, pseudogeneprovided by MGI
Primary source
MGI:MGI:3782198
See related
AllianceGenome:MGI:3782198
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm4024
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Genomic context

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See Tmed10-ps in Genome Data Viewer
Location:
13 A3.3; 13 14.44 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (36174240..36180221, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (35990257..35995172, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_34183 Neighboring gene ribonuclease P 40 subunit Neighboring gene STARR-seq mESC enhancer starr_34184 Neighboring gene protein phosphatase 1, regulatory subunit 3G Neighboring gene predicted gene, 30127 Neighboring gene predicted gene, 18132 Neighboring gene LYR motif containing 4 Neighboring gene STARR-positive B cell enhancer ABC_E7224 Neighboring gene STARR-seq mESC enhancer starr_34186 Neighboring gene phenylalanine-tRNA synthetase 2, mitochondrial Neighboring gene STARR-seq mESC enhancer starr_34187 Neighboring gene STARR-seq mESC enhancer starr_34188 Neighboring gene predicted gene, 40912 Neighboring gene STARR-seq mESC enhancer starr_34189 Neighboring gene STARR-seq mESC enhancer starr_34190 Neighboring gene STARR-seq mESC enhancer starr_34191 Neighboring gene STARR-seq mESC enhancer starr_34192 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:36458293-36458547 Neighboring gene STARR-seq mESC enhancer starr_34193 Neighboring gene high mobility group box 1-like pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
  
enables syntaxin binding ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in COPI-coated vesicle budding ISO
Inferred from Sequence Orthology
more info
  
involved_in cytosol to ERGIC protein transport ISO
Inferred from Sequence Orthology
more info
  
involved_in intracellular protein transport ISO
Inferred from Sequence Orthology
more info
  
involved_in positive regulation of interleukin-1 production ISO
Inferred from Sequence Orthology
more info
  
involved_in positive regulation of protein secretion ISO
Inferred from Sequence Orthology
more info
  
involved_in protein localization to ERGIC ISO
Inferred from Sequence Orthology
more info
  
involved_in regulation of amyloid-beta formation ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus ISO
Inferred from Sequence Orthology
more info
  
located_in endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
  
located_in endoplasmic reticulum-Golgi intermediate compartment ISO
Inferred from Sequence Orthology
more info
  
part_of gamma-secretase complex ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
transmembrane emp24 domain-containing protein 10-like
Names
predicted pseudogene 4024

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    36174240..36180221 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036158265.1 → XP_036014158.1  transmembrane emp24 domain-containing protein 10-like

    Conserved Domains (1) summary
    pfam01105
    Location:31 → 213
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD
Nucleotide Protein Strain
Heading Accession and Version

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