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LOC100363472 nuclear receptor-binding factor 2-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 100363472, updated on 29-Feb-2024

Summary

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Symbol
LOC100363472provided by RGD
Full Name
nuclear receptor-binding factor 2-likeprovided by RGD
Primary source
RGD:2322973
See related
Ensembl:ENSRNOG00000002200 AllianceGenome:RGD:2322973
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
AABR07072371.1
Expression
Biased expression in Liver (RPKM 157.1), Adrenal (RPKM 92.9) and 9 other tissues See more
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Genomic context

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See LOC100363472 in Genome Data Viewer
Location:
14p22
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (9288591..9290533)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (8984365..8986171)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (10624101..10625913)

Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene coenzyme Q2, polyprenyltransferase Neighboring gene uncharacterized LOC120096567 Neighboring gene uncharacterized LOC134481703 Neighboring gene ubiquitin-conjugating enzyme E2 variant 2-like Neighboring gene placenta associated 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RGD

Process Evidence Code Pubs
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in autophagosome IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
nuclear receptor-binding factor 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086032.1 Reference GRCr8

    Range
    9288591..9290533
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002728074.7 → XP_002728120.1  nuclear receptor-binding factor 2-like isoform X1

    See identical proteins and their annotated locations for XP_002728120.1

    UniProtKB/Swiss-Prot
    Q9QYK3
    UniProtKB/TrEMBL
    A0A8I5ZRU1
    Related
    ENSRNOP00000080869.1
    Conserved Domains (1) summary
    pfam08961
    Location:46 → 284
    DUF1875; Domain of unknown function (DUF1875)

  2. XM_063273737.1 → XP_063129807.1  nuclear receptor-binding factor 2-like isoform X2

Nucleotide Protein Strain
Heading Accession and Version

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