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RAN RAN, member RAS oncogene family [ Canis lupus familiaris (dog) ]

Gene ID: 100499482, updated on 8-Mar-2024

Summary

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Official Symbol
RANprovided by VGNC
Official Full Name
RAN, member RAS oncogene familyprovided by VGNC
Primary source
VGNC:VGNC:59442
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 26
Exon count:
7
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 26 NC_051830.1 (1680668..1683666, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 26 NC_006608.4 (1635546..1637515, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 26 NC_049247.1 (1621482..1623431, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 26 NC_049286.1 (1617356..1619315, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 26 NC_049767.1 (1714300..1716258, complement)

Chromosome 26 - NC_051830.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene adhesion G protein-coupled receptor D1 Neighboring gene syntaxin 2 Neighboring gene RIMS binding protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence of a canine cDNA clone encoding a Ran/TC4 GTP-binding protein. Dupree P, et al. Gene, 1992 Oct 21. PMID 1398150
  2. Structural basis for cell-cycle-dependent nuclear import mediated by the karyopherin Kap121p. Kobayashi J, et al. J Mol Biol, 2013 Jun 12. PMID 23541588

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal subunit export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GTP-binding nuclear protein Ran
NP_001181913.1
XP_038291993.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001194984.1 → NP_001181913.1  GTP-binding nuclear protein Ran

    See identical proteins and their annotated locations for NP_001181913.1

    Status: PROVISIONAL

    Source sequence(s)
    Z11922
    UniProtKB/Swiss-Prot
    P62825
    UniProtKB/TrEMBL
    A0A8C0QZB6
    Conserved Domains (1) summary
    smart00176
    Location:16 → 215
    RAN; Ran (Ras-related nuclear proteins) /TC4 subfamily of small GTPases

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051830.1 Reference ROS_Cfam_1.0

    Range
    1680668..1683666 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038436065.1 → XP_038291993.1  GTP-binding nuclear protein Ran isoform X1

    UniProtKB/Swiss-Prot
    P62825
    UniProtKB/TrEMBL
    A0A8C0QZB6
    Conserved Domains (1) summary
    smart00176
    Location:16 → 215
    RAN; Ran (Ras-related nuclear proteins) /TC4 subfamily of small GTPases

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049286.1 Alternate UMICH_Zoey_3.1

    Range
    1617356..1619315 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049767.1 Alternate UNSW_CanFamBas_1.0

    Range
    1714300..1716258 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049247.1 Alternate UU_Cfam_GSD_1.0

    Range
    1621482..1623431 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006608.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    1635546..1637515 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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