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Gapdh glyceraldehyde-3-phosphate dehydrogenase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100736557, updated on 8-Mar-2024

Summary

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Gene symbol
Gapdh
Gene description
glyceraldehyde-3-phosphate dehydrogenase
Locus tag
I79_001391
See related
Ensembl:ENSCGRG00015003621
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
GAPD
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
7
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613610.1 (3572132..3575848)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 8 NC_048601.1 (21256594..21260272)

NW_003613610.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L51 Neighboring gene non-SMC condensin I complex subunit D2 Neighboring gene microRNA mir-2424 Neighboring gene intermediate filament family orphan 1 Neighboring gene NOP2 nucleolar protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Nucleotide sequence of hamster glyceraldehyde-3-phosphate dehydrogenase mRNA. Vincent S, et al. Nucleic Acids Res, 1990 May 25. PMID 2349105, Free PMC Article
  2. Prediction of transcribed PIWI-interacting RNAs from CHO RNAseq data. Gerstl MP, et al. J Biotechnol, 2013 Jun 20. PMID 23639388
  3. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glyceraldehyde-3-phosphate dehydrogenase
Names
Peptidyl-cysteine S-nitrosylase GAPDH
NP_001231783.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001244854.2 → NP_001231783.1  glyceraldehyde-3-phosphate dehydrogenase

    See identical proteins and their annotated locations for NP_001231783.1

    Status: PROVISIONAL

    Source sequence(s)
    X52123
    UniProtKB/Swiss-Prot
    P17244
    UniProtKB/TrEMBL
    A0A8C2LLJ7
    Related
    ENSCGRP00015004598.1, ENSCGRT00015005690.2
    Conserved Domains (3) summary
    COG0057
    Location:1 → 333
    GapA; Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]
    pfam00044
    Location:2 → 150
    Gp_dh_N; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
    pfam02800
    Location:155 → 312
    Gp_dh_C; Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613610.1 Reference CriGri_1.0 Primary Assembly

    Range
    3572132..3575848
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048601.1 Alternate CriGri-PICRH-1.0

    Range
    21256594..21260272
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P17244.2 GenPept UniProtKB/Swiss-Prot:P17244

Gene LinkOut

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