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Chit1 chitinase 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100750757, updated on 8-Mar-2024

Summary

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Gene symbol
Chit1
Gene description
chitinase 1
See related
Ensembl:ENSCGRG00015000370
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613706.1 (21622..32772)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 5 NC_048598.1 (55057554..55068930, complement)

NW_003613706.1Genomic Context describing neighboring genes Neighboring gene chitinase 3 like 1 Neighboring gene myosin binding protein H

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chitin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitotriosidase-1
Names
chitinase 1 (chitotriosidase)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613706.1 Reference CriGri_1.0 Primary Assembly

    Range
    21622..32772
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003498841.3 → XP_003498889.3  chitotriosidase-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2LJY0
    Conserved Domains (2) summary
    cd02872
    Location:24 → 383
    GH18_chitolectin_chitotriosidase; This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active ...
    smart00494
    Location:417 → 464
    ChtBD2; Chitin-binding domain type 2

  2. XM_035449660.1 → XP_035305551.1  chitotriosidase-1 isoform X2

    Conserved Domains (2) summary
    cd02872
    Location:24 → 364
    GH18_chitolectin_chitotriosidase; This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active ...
    smart00494
    Location:398 → 445
    ChtBD2; Chitin-binding domain type 2

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048598.1 Alternate CriGri-PICRH-1.0

    Range
    55057554..55068930 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035445647.1 → XP_035301538.1  chitotriosidase-1 isoform X2

    UniProtKB/TrEMBL
    A0A9J7GXG9
    Conserved Domains (2) summary
    cd02872
    Location:24 → 364
    GH18_chitolectin_chitotriosidase; This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active ...
    smart00494
    Location:398 → 445
    ChtBD2; Chitin-binding domain type 2

  2. XM_027417570.2 → XP_027273371.2  chitotriosidase-1 isoform X1

    UniProtKB/TrEMBL
    A0A9J7G0Z7
    Related
    ENSCGRP00015000396.2, ENSCGRT00015000531.2
    Conserved Domains (2) summary
    cd02872
    Location:24 → 383
    GH18_chitolectin_chitotriosidase; This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active ...
    smart00494
    Location:417 → 464
    ChtBD2; Chitin-binding domain type 2
Nucleotide Protein Strain
Heading Accession and Version

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