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Agmat agmatinase (putative) [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100752066, updated on 8-Mar-2024

Summary

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Gene symbol
Agmat
Gene description
agmatinase (putative)
Locus tag
I79_020091
See related
Ensembl:ENSCGRG00015001687
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003615153.1 (246711..268416, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (11501304..11515378, complement)

NW_003615153.1Genomic Context describing neighboring genes Neighboring gene caspase-9-like Neighboring gene caspase 9 Neighboring gene DnaJ heat shock protein family (Hsp40) member C16 Neighboring gene protein DDI1 homolog 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables agmatinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in putrescine biosynthetic process from arginine, using agmatinase IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
agmatinase, mitochondrial
Names
Agmatinase, mitochondrial
agmatinase
agmatine ureohydrolase (agmatinase)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003615153.1 Reference CriGri_1.0 Primary Assembly

    Range
    246711..268416 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003511542.3 → XP_003511590.1  agmatinase, mitochondrial isoform X2

    See identical proteins and their annotated locations for XP_003511590.1

    UniProtKB/TrEMBL
    A0A8C2MYD4, A0A9J7FF08
    Conserved Domains (1) summary
    cd11592
    Location:59 → 347
    Agmatinase_PAH; Agmatinase-like family includes proclavaminic acid amidinohydrolase

  2. XM_035461866.1 → XP_035317757.1  agmatinase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8C2MYD4, A0A9J7GSQ8
    Conserved Domains (1) summary
    cd11592
    Location:59 → 355
    Agmatinase_PAH; Agmatinase-like family includes proclavaminic acid amidinohydrolase

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    11501304..11515378 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027399947.2 → XP_027255748.1  agmatinase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8C2MYD4, A0A9J7FF08
    Related
    ENSCGRP00015047702.1, ENSCGRT00015059894.1

  2. XM_035439433.1 → XP_035295324.1  agmatinase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8C2MYD4, A0A9J7GSQ8
    Conserved Domains (1) summary
    cd11592
    Location:59 → 355
    Agmatinase_PAH; Agmatinase-like family includes proclavaminic acid amidinohydrolase
Nucleotide Protein Strain
Heading Accession and Version

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