Rpe ribulose-5-phosphate-3-epimerase [Cricetulus griseus (Chinese hamster)] - Gene

Summary

Gene symbol: Rpe
Gene description: ribulose-5-phosphate-3-epimerase
See related: Ensembl:ENSCGRG00015028899
Gene type: protein coding
RefSeq status: MODEL
Organism: Cricetulus griseus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 2

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
104	current	CriGri_1.0 (GCF_000223135.1)	Unplaced Scaffold	NW_003613727.1 (1283108..1301360, complement)
104	current	CriGri-PICRH-1.0 (GCF_003668045.3)	2	NC_048595.1 (420457863..420476007)

NW_003613727.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

MARC_5533-5534:1031674173:1 (e-PCR)
- UniSTS:269537

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables D-ribulose-phosphate 3-epimerase activity	IEA Inferred from Electronic Annotation more info	PubMed
enables metal ion binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in carbohydrate metabolic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in pentose-phosphate shunt	IEA Inferred from Electronic Annotation more info	PubMed
involved_in pentose-phosphate shunt, non-oxidative branch	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytosol	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: ribulose-phosphate 3-epimerase

Names: Ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

NW_003613727.1 Reference CriGri_1.0 Primary Assembly

Range

1283108..1301360 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_007640070.4 → XP_007638260.1 ribulose-phosphate 3-epimerase isoform X1

See identical proteins and their annotated locations for XP_007638260.1

UniProtKB/TrEMBL

A0A8C2MKD3

Conserved Domains (1) summary

cd00429
Location:6 → 221

RPE; Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose ...
XM_003499286.5 → XP_003499334.1 ribulose-phosphate 3-epimerase isoform X2

See identical proteins and their annotated locations for XP_003499334.1

UniProtKB/TrEMBL

G3H4X1

Conserved Domains (1) summary

cd00429
Location:6 → 214

RPE; Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose ...
XM_035452486.1 → XP_035308377.1 ribulose-phosphate 3-epimerase isoform X4

UniProtKB/TrEMBL

A0A9J7GSG0

Conserved Domains (1) summary

cd00429
Location:1 → 146

RPE; Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose ...
XM_007640071.4 → XP_007638261.1 ribulose-phosphate 3-epimerase isoform X3

See identical proteins and their annotated locations for XP_007638261.1

UniProtKB/TrEMBL

A0A9J7F855

Conserved Domains (1) summary

cd00429
Location:2 → 174

RPE; Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose ...

Alternate CriGri-PICRH-1.0

Genomic

NC_048595.1 Alternate CriGri-PICRH-1.0

Range

420457863..420476007

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_027397129.2 → XP_027252930.1 ribulose-phosphate 3-epimerase isoform X1

UniProtKB/TrEMBL

A0A8C2MKD3

Related

ENSCGRP00015038681.1, ENSCGRT00015047092.2
XM_027397130.2 → XP_027252931.1 ribulose-phosphate 3-epimerase isoform X2

UniProtKB/TrEMBL

G3H4X1

Related

ENSCGRP00015052554.1, ENSCGRT00015068170.1
XM_035441018.1 → XP_035296909.1 ribulose-phosphate 3-epimerase isoform X4

UniProtKB/TrEMBL

A0A9J7GSG0

Conserved Domains (1) summary

cd00429
Location:1 → 146

RPE; Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose ...
XM_027397131.2 → XP_027252932.1 ribulose-phosphate 3-epimerase isoform X3

UniProtKB/TrEMBL

A0A9J7F855