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LOC100756511 dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100756511, updated on 19-Dec-2023

Summary

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Gene symbol
LOC100756511
Gene description
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A
Locus tag
I79_004117
See related
Ensembl:ENSCGRG00015021795
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Pde11a
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Genomic context

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Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613688.1 (1093..106189)
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613827.1 (52932..254017, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (98698143..99059509)

NW_003613827.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S12-like Neighboring gene ferritin light chain 1 Neighboring gene 40S ribosomal protein S9-like Neighboring gene cytochrome c, testis-specific Neighboring gene RNA binding motif protein 45

NW_003613688.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat protein 30A1 Neighboring gene tetratricopeptide repeat protein 30A2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-nucleotide phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A
Names
Tetratricopeptide repeat protein 30A1
phosphodiesterase 11A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613688.1 Reference CriGri_1.0 Primary Assembly

    Range
    1093..106189
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035446325.1 → XP_035302216.1  dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform X2

    Conserved Domains (1) summary
    pfam00233
    Location:86 → 364
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613827.1 Reference CriGri_1.0 Primary Assembly

    Range
    52932..254017 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003501029.2 → XP_003501077.2  dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform X1

    Conserved Domains (1) summary
    smart00065
    Location:217 → 380
    GAF; Domain present in phytochromes and cGMP-specific phosphodiesterases

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048599.1 Alternate CriGri-PICRH-1.0

    Range
    98698143..99059509
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027420128.1 → XP_027275929.1  dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform X3

    UniProtKB/TrEMBL
    A0A8C2LV55, A0A8C2QG68
    Related
    ENSCGRP00015028826.1, ENSCGRT00015035305.2
Nucleotide Protein Strain
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