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Galnt11 polypeptide N-acetylgalactosaminyltransferase 11 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100758359, updated on 8-Mar-2024

Summary

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Gene symbol
Galnt11
Gene description
polypeptide N-acetylgalactosaminyltransferase 11
See related
Ensembl:ENSCGRG00015005886
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
12
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613842.1 (233750..262379, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 8 NC_048601.1 (97245638..97275407, complement)

NW_003613842.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene lysine methyltransferase 2C Neighboring gene uncharacterized LOC118239868 Neighboring gene polypeptide N-acetylgalactosaminyltransferase like 5 Neighboring gene complement component 1 Q subcomponent-binding protein, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Notch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 11
Names
:polypeptide N-acetylgalactosaminyltransferase 11
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613842.1 Reference CriGri_1.0 Primary Assembly

    Range
    233750..262379 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007641958.4 → XP_007640148.1  polypeptide N-acetylgalactosaminyltransferase 11 isoform X2

    See identical proteins and their annotated locations for XP_007640148.1

    UniProtKB/TrEMBL
    A0A9J7KCB6
    Conserved Domains (2) summary
    cd02510
    Location:154 → 452
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:483 → 603
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_007641956.4 → XP_007640146.1  polypeptide N-acetylgalactosaminyltransferase 11 isoform X1

    See identical proteins and their annotated locations for XP_007640146.1

    UniProtKB/TrEMBL
    G3HB53
    Conserved Domains (4) summary
    cd02510
    Location:154 → 452
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:487 → 606
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:483 → 604
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    pfam13641
    Location:154 → 382
    Glyco_tranf_2_3; Glycosyltransferase like family 2

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048601.1 Alternate CriGri-PICRH-1.0

    Range
    97245638..97275407 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035448575.1 → XP_035304466.1  polypeptide N-acetylgalactosaminyltransferase 11 isoform X2

    UniProtKB/TrEMBL
    A0A9J7KCB6
    Related
    ENSCGRP00015007538.2, ENSCGRT00015009281.2
    Conserved Domains (2) summary
    cd02510
    Location:154 → 452
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:483 → 603
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_027428412.2 → XP_027284213.1  polypeptide N-acetylgalactosaminyltransferase 11 isoform X1

    UniProtKB/TrEMBL
    G3HB53
    Related
    ENSCGRP00015060684.1, ENSCGRT00015067688.1

  3. XM_027428411.2 → XP_027284212.1  polypeptide N-acetylgalactosaminyltransferase 11 isoform X1

    UniProtKB/TrEMBL
    G3HB53
    Related
    ENSCGRP00015056871.1, ENSCGRT00015055441.1
Nucleotide Protein Strain
Heading Accession and Version

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