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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference CriGri_1.0 Primary Assembly
Genomic
-
NW_003614305.1 Reference CriGri_1.0 Primary Assembly
- Range
-
17376..110683 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_003506909.4 → XP_003506957.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X3
See identical proteins and their annotated locations for XP_003506957.1
- UniProtKB/TrEMBL
-
A0A8C2MP20
- Conserved Domains (5) summary
-
- cd00139
Location:1772 → 2085
- PIPKc; Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate. CD alignment includes type II ...
- cd03334
Location:617 → 877
- Fab1_TCP; TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this ...
- cd04448
Location:357 → 438
- DEP_PIKfyve; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol ...
- cd15725
Location:154 → 215
- FYVE_PIKfyve_Fab1; FYVE domain found in metazoan PIKfyve, fungal and plant Fab1, and similar proteins
- cl12013
Location:1399 → 1446
- BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
-
XM_003506910.4 → XP_003506958.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X5
See identical proteins and their annotated locations for XP_003506958.1
- UniProtKB/TrEMBL
-
A0A8C2QLP7
- Conserved Domains (5) summary
-
- cd00139
Location:1727 → 2040
- PIPKc; Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate. CD alignment includes type II ...
- cd03334
Location:572 → 832
- Fab1_TCP; TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this ...
- cd04448
Location:368 → 449
- DEP_PIKfyve; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol ...
- cd15725
Location:165 → 226
- FYVE_PIKfyve_Fab1; FYVE domain found in metazoan PIKfyve, fungal and plant Fab1, and similar proteins
- cl12013
Location:1354 → 1401
- BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
-
XM_007647458.3 → XP_007645648.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X2
See identical proteins and their annotated locations for XP_007645648.1
- UniProtKB/TrEMBL
-
A0A9J7F7C9
- Conserved Domains (5) summary
-
- cd00139
Location:1783 → 2096
- PIPKc; Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate. CD alignment includes type II ...
- cd03334
Location:628 → 888
- Fab1_TCP; TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this ...
- cd04448
Location:368 → 449
- DEP_PIKfyve; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol ...
- cd15725
Location:165 → 226
- FYVE_PIKfyve_Fab1; FYVE domain found in metazoan PIKfyve, fungal and plant Fab1, and similar proteins
- cl12013
Location:1410 → 1457
- BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
-
XM_007647459.3 → XP_007645649.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X4
See identical proteins and their annotated locations for XP_007645649.1
- UniProtKB/TrEMBL
-
A0A9J7JE03
- Conserved Domains (5) summary
-
- cd00139
Location:1728 → 2041
- PIPKc; Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate. CD alignment includes type II ...
- cd03334
Location:573 → 833
- Fab1_TCP; TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this ...
- cd04448
Location:369 → 450
- DEP_PIKfyve; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol ...
- cd15725
Location:166 → 227
- FYVE_PIKfyve_Fab1; FYVE domain found in metazoan PIKfyve, fungal and plant Fab1, and similar proteins
- cl12013
Location:1355 → 1402
- BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
-
XM_007647456.3 → XP_007645646.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1
See identical proteins and their annotated locations for XP_007645646.1
- UniProtKB/TrEMBL
-
A0A9J7F842
- Conserved Domains (4) summary
-
- cd03334
Location:629 → 889
- Fab1_TCP; TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this ...
- cd04448
Location:369 → 450
- DEP_PIKfyve; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol ...
- cd15725
Location:166 → 227
- FYVE_PIKfyve_Fab1; FYVE domain found in metazoan PIKfyve, fungal and plant Fab1, and similar proteins
- cd17300
Location:1830 → 2096
- PIPKc_PIKfyve; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in 1-phosphatidylinositol-3-phosphate 5-kinase and similar proteins
-
XM_035458738.1 → XP_035314629.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1
- UniProtKB/TrEMBL
-
A0A9J7F842
- Conserved Domains (4) summary
-
- cd03334
Location:629 → 889
- Fab1_TCP; TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this ...
- cd04448
Location:369 → 450
- DEP_PIKfyve; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol ...
- cd15725
Location:166 → 227
- FYVE_PIKfyve_Fab1; FYVE domain found in metazoan PIKfyve, fungal and plant Fab1, and similar proteins
- cd17300
Location:1830 → 2096
- PIPKc_PIKfyve; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in 1-phosphatidylinositol-3-phosphate 5-kinase and similar proteins
-
XM_007647457.4 → XP_007645647.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1
See identical proteins and their annotated locations for XP_007645647.1
- UniProtKB/TrEMBL
-
A0A9J7F842
- Conserved Domains (4) summary
-
- cd03334
Location:629 → 889
- Fab1_TCP; TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this ...
- cd04448
Location:369 → 450
- DEP_PIKfyve; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol ...
- cd15725
Location:166 → 227
- FYVE_PIKfyve_Fab1; FYVE domain found in metazoan PIKfyve, fungal and plant Fab1, and similar proteins
- cd17300
Location:1830 → 2096
- PIPKc_PIKfyve; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in 1-phosphatidylinositol-3-phosphate 5-kinase and similar proteins
Alternate CriGri-PICRH-1.0
Genomic
-
NC_048595.1 Alternate CriGri-PICRH-1.0
- Range
-
419156244..419251392
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_027397108.1 → XP_027252909.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1
- UniProtKB/TrEMBL
-
A0A9J7F842
- Related
- ENSCGRP00015056573.1, ENSCGRT00015069087.1
- Conserved Domains (4) summary
-
- cd03334
Location:629 → 889
- Fab1_TCP; TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this ...
- cd04448
Location:369 → 450
- DEP_PIKfyve; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol ...
- cd15725
Location:166 → 227
- FYVE_PIKfyve_Fab1; FYVE domain found in metazoan PIKfyve, fungal and plant Fab1, and similar proteins
- cd17300
Location:1830 → 2096
- PIPKc_PIKfyve; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in 1-phosphatidylinositol-3-phosphate 5-kinase and similar proteins
-
XM_027397112.1 → XP_027252913.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X4
- UniProtKB/TrEMBL
-
A0A9J7JE03
-
XM_027397110.1 → XP_027252911.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X2
- UniProtKB/TrEMBL
-
A0A9J7F7C9
-
XM_027397113.1 → XP_027252914.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X5
- UniProtKB/TrEMBL
-
A0A8C2QLP7
- Related
- ENSCGRP00015038672.2, ENSCGRT00015047082.2
-
XM_027397111.1 → XP_027252912.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X3
- UniProtKB/TrEMBL
-
A0A8C2MP20
- Related
- ENSCGRP00015038671.1, ENSCGRT00015047081.2
-
XM_035441004.1 → XP_035296895.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1
- UniProtKB/TrEMBL
-
A0A9J7F842
- Conserved Domains (4) summary
-
- cd03334
Location:629 → 889
- Fab1_TCP; TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this ...
- cd04448
Location:369 → 450
- DEP_PIKfyve; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol ...
- cd15725
Location:166 → 227
- FYVE_PIKfyve_Fab1; FYVE domain found in metazoan PIKfyve, fungal and plant Fab1, and similar proteins
- cd17300
Location:1830 → 2096
- PIPKc_PIKfyve; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in 1-phosphatidylinositol-3-phosphate 5-kinase and similar proteins
-
XM_027397109.2 → XP_027252910.1 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1
- UniProtKB/TrEMBL
-
A0A9J7F842
- Conserved Domains (4) summary
-
- cd03334
Location:629 → 889
- Fab1_TCP; TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this ...
- cd04448
Location:369 → 450
- DEP_PIKfyve; DEP (Dishevelled, Egl-10, and Pleckstrin) domain found in fungal RhoGEF (GDP/GTP exchange factor) PIKfyve-like proteins. PIKfyve contains N-terminal Fyve finger and DEP domains, a central chaperonin-like domain and a C-terminal PIPK (phosphatidylinositol ...
- cd15725
Location:166 → 227
- FYVE_PIKfyve_Fab1; FYVE domain found in metazoan PIKfyve, fungal and plant Fab1, and similar proteins
- cd17300
Location:1830 → 2096
- PIPKc_PIKfyve; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain found in 1-phosphatidylinositol-3-phosphate 5-kinase and similar proteins