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Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100759109, updated on 8-Mar-2024

Summary

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Gene symbol
Hoga1
Gene description
4-hydroxy-2-oxoglutarate aldolase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613664.1 (1445547..1471176)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (19478130..19504102, complement)

NW_003613664.1Genomic Context describing neighboring genes Neighboring gene ubiquitin domain containing 1 Neighboring gene chromosome unknown C10orf62 homolog Neighboring gene ankyrin repeat domain 2 Neighboring gene MORN repeat containing 4 Neighboring gene phosphatidylinositol 4-kinase type 2 alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-hydroxy-tetrahydrodipicolinate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables N-acetylneuraminate lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-hydroxy-2-oxoglutarate aldolase, mitochondrial
Names
putative 4-hydroxy-2-oxoglutarate aldolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613664.1 Reference CriGri_1.0 Primary Assembly

    Range
    1445547..1471176
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016967544.3 → XP_016823033.1  4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A9J7FRC3
    Conserved Domains (1) summary
    cd00408
    Location:32 → 269
    DHDPS-like; Dihydrodipicolinate synthase family

  2. XM_003497758.5 → XP_003497806.1  4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_003497806.1

    UniProtKB/TrEMBL
    A0A8C2LUT2
    Conserved Domains (1) summary
    cd00408
    Location:32 → 312
    DHDPS-like; Dihydrodipicolinate synthase family

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    19478130..19504102 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027407303.2 → XP_027263104.1  4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A9J7FRC3

  2. XM_027407302.2 → XP_027263103.1  4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8C2LUT2
Nucleotide Protein Strain
Heading Accession and Version

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