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LOC100760748 heparan sulfate 2-O-sulfotransferase 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100760748, updated on 19-Dec-2023

Summary

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Gene symbol
LOC100760748
Gene description
heparan sulfate 2-O-sulfotransferase 1
Locus tag
I79_024070
See related
Ensembl:ENSCGRG00015011330
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC100760748 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003616928.1 (75936..92496, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (14555834..14697925)

NW_003616928.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118237992

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 2-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate 2-O-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003616928.1 Reference CriGri_1.0 Primary Assembly

    Range
    75936..92496 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003514763.4 → XP_003514811.3  heparan sulfate 2-O-sulfotransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C2LVE3
    Conserved Domains (1) summary
    pfam03567
    Location:71 → 326
    Sulfotransfer_2; Sulfotransferase family

  2. XM_035437994.1 → XP_035293885.1  heparan sulfate 2-O-sulfotransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A9J7JBN7
    Conserved Domains (1) summary
    pfam03567
    Location:71 → 327
    Sulfotransfer_2; Sulfotransferase family

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    14555834..14697925
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027395887.2 → XP_027251688.1  heparan sulfate 2-O-sulfotransferase 1 isoform X3

    UniProtKB/TrEMBL
    A0A9J7JBN7
    Related
    ENSCGRP00015052504.1, ENSCGRT00015056049.1
    Conserved Domains (1) summary
    pfam03567
    Location:71 → 327
    Sulfotransfer_2; Sulfotransferase family

  2. XM_027395888.1 → XP_027251689.1  heparan sulfate 2-O-sulfotransferase 1 isoform X4

    UniProtKB/TrEMBL
    A0A8C2LVE3
    Conserved Domains (1) summary
    pfam03567
    Location:71 → 326
    Sulfotransfer_2; Sulfotransferase family

  3. XM_035450349.1 → XP_035306240.1  heparan sulfate 2-O-sulfotransferase 1 isoform X6

    UniProtKB/TrEMBL
    A0A9J7KDP5
    Conserved Domains (1) summary
    pfam03567
    Location:13 → 269
    Sulfotransfer_2; Sulfotransferase family

  4. XM_035450348.1 → XP_035306239.1  heparan sulfate 2-O-sulfotransferase 1 isoform X5

    UniProtKB/TrEMBL
    A0A9J7K2G7
    Related
    ENSCGRP00015014721.2, ENSCGRT00015018048.2
    Conserved Domains (1) summary
    pfam03567
    Location:32 → 288
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein Strain
Heading Accession and Version

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