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Galntl6 polypeptide N-acetylgalactosaminyltransferase like 6 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100761752, updated on 8-Mar-2024

Summary

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Gene symbol
Galntl6
Gene description
polypeptide N-acetylgalactosaminyltransferase like 6
Locus tag
I79_011360
See related
Ensembl:ENSCGRG00015006171
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614051.1 (6028..683859)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (236025808..237053778, complement)

NW_003614051.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L26-like Neighboring gene polypeptide N-acetylgalactosaminyltransferase 7 Neighboring gene high mobility group box 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase-like 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614051.1 Reference CriGri_1.0 Primary Assembly

    Range
    6028..683859
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035457073.1 → XP_035312964.1  polypeptide N-acetylgalactosaminyltransferase-like 6 isoform X1

    Conserved Domains (2) summary
    cd02510
    Location:97 → 392
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:408 → 536
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    236025808..237053778 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035451502.1 → XP_035307393.1  polypeptide N-acetylgalactosaminyltransferase-like 6 isoform X2

    UniProtKB/TrEMBL
    A0A8C2MAG9
    Related
    ENSCGRP00015007918.2, ENSCGRT00015009775.2
    Conserved Domains (2) summary
    cd02510
    Location:143 → 438
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:454 → 582
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

RNA

  1. XR_004771965.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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