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LOC100762108 bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100762108, updated on 19-Dec-2023

Summary

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Gene symbol
LOC100762108
Gene description
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4
Locus tag
I79_024678
See related
Ensembl:ENSCGRG00015002997
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Ndst4
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003617553.1 (3046..49895, complement)
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003620166.1 (9122..10099, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (32998502..33272506, complement)

NW_003620166.1Genomic Context describing neighboring genes

NW_003617553.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4
Names
N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003617553.1 Reference CriGri_1.0 Primary Assembly

    Range
    3046..49895 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003515214.4 → XP_003515262.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4 isoform X1

    UniProtKB/TrEMBL
    G3ILB4
    Conserved Domains (1) summary
    pfam00685
    Location:82 → 333
    Sulfotransfer_1; Sulfotransferase domain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003620166.1 Reference CriGri_1.0 Primary Assembly

    Range
    9122..10099 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003515808.4 → XP_003515856.2  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4 isoform X2

    UniProtKB/TrEMBL
    G3INM6
    Conserved Domains (1) summary
    pfam12062
    Location:20 → 326
    HSNSD; heparan sulfate-N-deacetylase

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    32998502..33272506 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027395414.2 → XP_027251215.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4 isoform X3

    UniProtKB/TrEMBL
    A0A8C2LFR5, A0A9J7JBC6
    Related
    ENSCGRP00015059756.1, ENSCGRT00015074862.1
Nucleotide Protein Strain
Heading Accession and Version

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