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Amt aminomethyltransferase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100763091, updated on 8-Mar-2024

Summary

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Gene symbol
Amt
Gene description
aminomethyltransferase
See related
Ensembl:ENSCGRG00015012924
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613788.1 (1959764..1966733)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (216475791..216482760)

NW_003613788.1Genomic Context describing neighboring genes Neighboring gene bassoon presynaptic cytomatrix protein Neighboring gene dystroglycan 1 Neighboring gene nicolin 1, tubulin polyglutamylase complex subunit Neighboring gene T cell leukemia translocation altered Neighboring gene ras homolog family member A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aminomethyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aminomethyltransferase, mitochondrial
Names
Aminomethyltransferase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613788.1 Reference CriGri_1.0 Primary Assembly

    Range
    1959764..1966733
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035454550.1 → XP_035310441.1  aminomethyltransferase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A9J7GXR5
    Conserved Domains (1) summary
    cl39066
    Location:44 → 411
    GCV_T; Aminomethyltransferase folate-binding domain

  2. XM_007641131.4 → XP_007639321.1  aminomethyltransferase, mitochondrial isoform X2

    See identical proteins and their annotated locations for XP_007639321.1

    UniProtKB/TrEMBL
    G3H8F6
    Conserved Domains (1) summary
    cl39066
    Location:39 → 406
    GCV_T; Aminomethyltransferase folate-binding domain

  3. XM_035454549.1 → XP_035310440.1  aminomethyltransferase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A9J7GXR5
    Conserved Domains (1) summary
    cl39066
    Location:44 → 411
    GCV_T; Aminomethyltransferase folate-binding domain

  4. XM_035454551.1 → XP_035310442.1  aminomethyltransferase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    G3H8F6
    Conserved Domains (1) summary
    cl39066
    Location:39 → 406
    GCV_T; Aminomethyltransferase folate-binding domain

  5. XM_007641133.4 → XP_007639323.1  aminomethyltransferase, mitochondrial isoform X3

    See identical proteins and their annotated locations for XP_007639323.1

    UniProtKB/TrEMBL
    A0A061I6A7
    Conserved Domains (1) summary
    cl39066
    Location:38 → 405
    GCV_T; Aminomethyltransferase folate-binding domain

  6. XM_035454553.1 → XP_035310444.1  aminomethyltransferase, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A061I6A7
    Conserved Domains (1) summary
    cl39066
    Location:38 → 405
    GCV_T; Aminomethyltransferase folate-binding domain

  7. XM_003500353.5 → XP_003500401.1  aminomethyltransferase, mitochondrial isoform X4

    See identical proteins and their annotated locations for XP_003500401.1

    UniProtKB/TrEMBL
    A0A061I3Y5
    Conserved Domains (3) summary
    PLN02319
    Location:33 → 400
    PLN02319; aminomethyltransferase
    pfam01571
    Location:39 → 291
    GCV_T; Aminomethyltransferase folate-binding domain
    pfam08669
    Location:301 → 392
    GCV_T_C; Glycine cleavage T-protein C-terminal barrel domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048597.1 Alternate CriGri-PICRH-1.0

    Range
    216475791..216482760
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035443960.1 → XP_035299851.1  aminomethyltransferase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A9J7GXR5
    Related
    ENSCGRP00015016793.2, ENSCGRT00015020593.2
    Conserved Domains (1) summary
    cl39066
    Location:44 → 411
    GCV_T; Aminomethyltransferase folate-binding domain

  2. XM_027414547.2 → XP_027270348.1  aminomethyltransferase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    G3H8F6
    Related
    ENSCGRP00015016811.2, ENSCGRT00015020615.2
    Conserved Domains (1) summary
    cl39066
    Location:39 → 406
    GCV_T; Aminomethyltransferase folate-binding domain

  3. XM_035443959.1 → XP_035299850.1  aminomethyltransferase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A9J7GXR5
    Conserved Domains (1) summary
    cl39066
    Location:44 → 411
    GCV_T; Aminomethyltransferase folate-binding domain

  4. XM_035443961.1 → XP_035299852.1  aminomethyltransferase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    G3H8F6
    Conserved Domains (1) summary
    cl39066
    Location:39 → 406
    GCV_T; Aminomethyltransferase folate-binding domain

  5. XM_027414548.2 → XP_027270349.1  aminomethyltransferase, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A061I6A7
    Conserved Domains (1) summary
    cl39066
    Location:38 → 405
    GCV_T; Aminomethyltransferase folate-binding domain

  6. XM_035443962.1 → XP_035299853.1  aminomethyltransferase, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A061I6A7
    Conserved Domains (1) summary
    cl39066
    Location:38 → 405
    GCV_T; Aminomethyltransferase folate-binding domain

  7. XM_027414549.2 → XP_027270350.1  aminomethyltransferase, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A061I3Y5
Nucleotide Protein Strain
Heading Accession and Version

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