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Hmgcll1 3-hydroxy-3-methylglutaryl-CoA lyase like 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100763147, updated on 11-Apr-2024

Summary

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Gene symbol
Hmgcll1
Gene description
3-hydroxy-3-methylglutaryl-CoA lyase like 1
See related
Ensembl:ENSCGRG00015014442
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613582.1 (489049..618782, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (187208774..187339177)

NW_003613582.1Genomic Context describing neighboring genes Neighboring gene GDNF family receptor alpha like Neighboring gene 60S ribosomal protein L23a-like Neighboring gene bone morphogenetic protein 5 Neighboring gene NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial-like Neighboring gene tudor and KH domain-containing protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydroxymethylglutaryl-CoA lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-leucine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ketone body biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic
Names
3-hydroxymethyl-3-methylglutaryl-CoA lyase L1
3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1
3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1
putative 3-hydroxymethyl-3-methylglutaryl-CoA lyase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613582.1 Reference CriGri_1.0 Primary Assembly

    Range
    489049..618782 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035457982.1 → XP_035313873.1  3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic isoform X3

    Conserved Domains (1) summary
    cl21457
    Location:41 → 233
    TIM; TIM-like beta/alpha barrel domains

  2. XM_035457963.1 → XP_035313854.1  3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic isoform X2

    Conserved Domains (1) summary
    cl21457
    Location:41 → 304
    TIM; TIM-like beta/alpha barrel domains

  3. XM_003495009.4 → XP_003495057.1  3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic isoform X1

    Conserved Domains (2) summary
    PLN02746
    Location:41 → 336
    PLN02746; hydroxymethylglutaryl-CoA lyase
    pfam00682
    Location:48 → 321
    HMGL-like; HMGL-like

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048597.1 Alternate CriGri-PICRH-1.0

    Range
    187208774..187339177
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027411131.2 → XP_027266932.1  3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A8C2M501
    Related
    ENSCGRP00015018990.1, ENSCGRT00015023396.2

  2. XM_035444484.1 → XP_035300375.1  3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic isoform X2

    UniProtKB/TrEMBL
    A0A8C2QHZ9
    Related
    ENSCGRP00015018994.1, ENSCGRT00015023400.2
    Conserved Domains (1) summary
    cl21457
    Location:41 → 304
    TIM; TIM-like beta/alpha barrel domains

  3. XM_035444485.1 → XP_035300376.1  3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic isoform X3

    UniProtKB/TrEMBL
    A0A8C2M3A6
    Related
    ENSCGRP00015019012.1, ENSCGRT00015023422.2
    Conserved Domains (1) summary
    cl21457
    Location:41 → 233
    TIM; TIM-like beta/alpha barrel domains
Nucleotide Protein Strain
Heading Accession and Version

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