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Slc1a5 solute carrier family 1 member 5 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100763902, updated on 8-Mar-2024

Summary

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Gene symbol
Slc1a5
Gene description
solute carrier family 1 member 5
Locus tag
I79_018852
See related
Ensembl:ENSCGRG00015017892
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614899.1 (306467..315686, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 9 NC_048602.1 (11414896..11429491)

NW_003614899.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113839462 Neighboring gene striatin 4 Neighboring gene adaptor related protein complex 2 subunit sigma 1 Neighboring gene carcinoembryonic antigen-related cell adhesion molecule 3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-aspartate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neutral L-amino acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-aspartate import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neutral amino acid transporter B(0)
Names
Neutral amino acid transporter B(0)
solute carrier family 1 (neutral amino acid transporter), member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614899.1 Reference CriGri_1.0 Primary Assembly

    Range
    306467..315686 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035461253.1 → XP_035317144.1  neutral amino acid transporter B(0) isoform X1

    Conserved Domains (1) summary
    cl00573
    Location:54 → 176
    SDF; Sodium:dicarboxylate symporter family

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048602.1 Alternate CriGri-PICRH-1.0

    Range
    11414896..11429491
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027431345.2 → XP_027287146.1  neutral amino acid transporter B(0) isoform X2

    UniProtKB/TrEMBL
    A0A3L7H4J3
    Related
    ENSCGRP00015023499.1, ENSCGRT00015028809.2

  2. XM_027431346.2 → XP_027287147.1  neutral amino acid transporter B(0) isoform X3

    UniProtKB/TrEMBL
    A0A9J7GIB9
Nucleotide Protein Strain
Heading Accession and Version

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