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LOC100765247 polypeptide N-acetylgalactosaminyltransferase 4 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100765247, updated on 8-Mar-2024

Summary

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Gene symbol
LOC100765247
Gene description
polypeptide N-acetylgalactosaminyltransferase 4
Locus tag
I79_011369
See related
Ensembl:ENSCGRG00015038114
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Galnt4
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614052.1 (1000765..1005599)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (164772574..164777705)

NW_003614052.1Genomic Context describing neighboring genes Neighboring gene ATPase plasma membrane Ca2+ transporting 1 Neighboring gene UPF0687 protein C20orf27 homolog Neighboring gene adenosine 3'-phospho 5'-phosphosulfate transporter 1-like Neighboring gene POC1 centriolar protein B Neighboring gene dual specificity phosphatase 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 4
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614052.1 Reference CriGri_1.0 Primary Assembly

    Range
    1000765..1005599
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035457075.1 → XP_035312966.1  polypeptide N-acetylgalactosaminyltransferase 4 isoform X1

    Conserved Domains (2) summary
    cd02510
    Location:138 → 436
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:450 → 578
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    164772574..164777705
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027394137.2 → XP_027249938.1  polypeptide N-acetylgalactosaminyltransferase 4 isoform X2

    UniProtKB/TrEMBL
    A0A9J7JAG3
    Related
    ENSCGRP00015039018.1, ENSCGRT00015068044.1
Nucleotide Protein Strain
Heading Accession and Version

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