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Slc9a5 solute carrier family 9 member A5 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100766142, updated on 8-Mar-2024

Summary

Gene symbol
Slc9a5
Gene description
solute carrier family 9 member A5
Locus tag
I79_016521
See related
Ensembl:ENSCGRG00015007037
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
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Genomic context

See Slc9a5 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
17
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614552.1 (283484..301589)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (181637378..181656769)

NW_003614552.1Genomic Context describing neighboring genes Neighboring gene Leucine-rich repeat-containing protein 29 Neighboring gene transmembrane protein 208 Neighboring gene formin homology 2 domain containing 1 Neighboring gene pleckstrin homology and RhoGEF domain containing G4 Neighboring gene potassium channel tetramerization domain containing 19

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in proton transmembrane transport PubMed 
involved_in regulation of pH PubMed 
involved_in sodium ion transport PubMed 
Component Evidence Code Pubs
located_in membrane PubMed 

General protein information

Preferred Names
sodium/hydrogen exchanger 5
Names
Sodium/hydrogen exchanger 5
solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614552.1 Reference CriGri_1.0 Primary Assembly

    Range
    283484..301589
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035459910.1XP_035315801.1  sodium/hydrogen exchanger 5 isoform X1

    UniProtKB/TrEMBL
    A0A8C2LAA4
    Conserved Domains (1) summary
    TIGR00840
    Location:43632
    b_cpa1; sodium/hydrogen exchanger 3
  2. XM_035459911.1XP_035315802.1  sodium/hydrogen exchanger 5 isoform X2

    UniProtKB/TrEMBL
    A0A8C2LAA4
    Conserved Domains (1) summary
    TIGR00840
    Location:43632
    b_cpa1; sodium/hydrogen exchanger 3
  3. XM_035459912.1XP_035315803.1  sodium/hydrogen exchanger 5 isoform X3

    UniProtKB/TrEMBL
    A0A8C2LAA4
    Conserved Domains (1) summary
    TIGR00840
    Location:43632
    b_cpa1; sodium/hydrogen exchanger 3
  4. XM_035459913.1XP_035315804.1  sodium/hydrogen exchanger 5 isoform X4

    UniProtKB/TrEMBL
    A0A8C2LAA4
    Conserved Domains (1) summary
    TIGR00840
    Location:71531
    b_cpa1; sodium/hydrogen exchanger 3
  5. XM_035459914.1XP_035315805.1  sodium/hydrogen exchanger 5 isoform X5

    UniProtKB/TrEMBL
    A0A8C2LAA4
    Conserved Domains (1) summary
    TIGR00840
    Location:71531
    b_cpa1; sodium/hydrogen exchanger 3
  6. XM_035459919.1XP_035315810.1  sodium/hydrogen exchanger 5 isoform X9

    Conserved Domains (1) summary
    TIGR00840
    Location:43575
    b_cpa1; sodium/hydrogen exchanger 3
  7. XM_035459915.1XP_035315806.1  sodium/hydrogen exchanger 5 isoform X6

    Conserved Domains (1) summary
    TIGR00840
    Location:43632
    b_cpa1; sodium/hydrogen exchanger 3
  8. XM_035459916.1XP_035315807.1  sodium/hydrogen exchanger 5 isoform X7

    Conserved Domains (1) summary
    TIGR00840
    Location:43575
    b_cpa1; sodium/hydrogen exchanger 3
  9. XM_035459917.1XP_035315808.1  sodium/hydrogen exchanger 5 isoform X7

    Conserved Domains (1) summary
    TIGR00840
    Location:43575
    b_cpa1; sodium/hydrogen exchanger 3
  10. XM_035459918.1XP_035315809.1  sodium/hydrogen exchanger 5 isoform X8

    Conserved Domains (1) summary
    TIGR00840
    Location:43575
    b_cpa1; sodium/hydrogen exchanger 3

RNA

  1. XR_004774683.1 RNA Sequence

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    181637378..181656769
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027405809.2XP_027261610.1  sodium/hydrogen exchanger 5 isoform X10

    UniProtKB/TrEMBL
    A0A8C2LAA4, A0A9J7FKN3
  2. XM_027405810.2XP_027261611.1  sodium/hydrogen exchanger 5 isoform X11

    UniProtKB/TrEMBL
    A0A8C2LAA4, A0A9J7FP81
    Related
    ENSCGRP00015009130.1, ENSCGRT00015011232.2
  3. XM_027405811.2XP_027261612.1  sodium/hydrogen exchanger 5 isoform X12

    UniProtKB/TrEMBL
    A0A8C2LAA4, A0A9J7FJH2
  4. XM_035442620.1XP_035298511.1  sodium/hydrogen exchanger 5 isoform X13

    UniProtKB/TrEMBL
    A0A8C2LAA4, A0A9J7GTH4
    Conserved Domains (1) summary
    TIGR00840
    Location:71531
    b_cpa1; sodium/hydrogen exchanger 3
  5. XM_035442621.1XP_035298512.1  sodium/hydrogen exchanger 5 isoform X14

    UniProtKB/TrEMBL
    A0A8C2LAA4, A0A9J7GSP8
    Conserved Domains (1) summary
    TIGR00840
    Location:71531
    b_cpa1; sodium/hydrogen exchanger 3
  6. XM_027405812.2XP_027261613.1  sodium/hydrogen exchanger 5 isoform X15

    UniProtKB/TrEMBL
    A0A9J7JG71, G3HZL4
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