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Alas1 5'-aminolevulinate synthase 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100766370, updated on 8-Mar-2024

Summary

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Gene symbol
Alas1
Gene description
5'-aminolevulinate synthase 1
Locus tag
I79_003263
See related
Ensembl:ENSCGRG00015009290
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613657.1 (3044459..3057529, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (214435622..214448698, complement)

NW_003613657.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118238542 Neighboring gene toll like receptor 9 Neighboring gene POC1 centriolar protein homolog A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5-aminolevulinate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in erythrocyte development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heme biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hemoglobin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5-aminolevulinate synthase, nonspecific, mitochondrial
Names
aminolevulinate, delta-, synthase 1
aminolevulinic acid synthase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613657.1 Reference CriGri_1.0 Primary Assembly

    Range
    3044459..3057529 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035442152.1 → XP_035298043.1  5-aminolevulinate synthase, nonspecific, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A9J7GVP8
    Conserved Domains (2) summary
    pfam09029
    Location:2 → 137
    Preseq_ALAS; 5-aminolevulinate synthase presequence
    cl18945
    Location:196 → 601
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...

  2. XM_003497635.5 → XP_003497683.1  5-aminolevulinate synthase, nonspecific, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_003497683.1

    UniProtKB/TrEMBL
    A0A8C2LBK4
    Conserved Domains (3) summary
    COG0156
    Location:197 → 588
    BioF; 7-keto-8-aminopelargonate synthetase or related enzyme [Coenzyme transport and metabolism]
    pfam09029
    Location:2 → 138
    Preseq_ALAS; 5-aminolevulinate synthase presequence
    cl18945
    Location:197 → 602
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048597.1 Alternate CriGri-PICRH-1.0

    Range
    214435622..214448698 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035443913.1 → XP_035299804.1  5-aminolevulinate synthase, nonspecific, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A9J7GVP8
    Related
    ENSCGRP00015012117.2, ENSCGRT00015014856.2
    Conserved Domains (2) summary
    pfam09029
    Location:2 → 137
    Preseq_ALAS; 5-aminolevulinate synthase presequence
    cl18945
    Location:196 → 601
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...

  2. XM_027414387.2 → XP_027270188.1  5-aminolevulinate synthase, nonspecific, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8C2LBK4
    Related
    ENSCGRP00015052128.1, ENSCGRT00015059734.1
Nucleotide Protein Strain
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