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Galnt15 polypeptide N-acetylgalactosaminyltransferase 15 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100766936, updated on 8-Mar-2024

Summary

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Gene symbol
Galnt15
Gene description
polypeptide N-acetylgalactosaminyltransferase 15
See related
Ensembl:ENSCGRG00015021376
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Galntl2
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613589.1 (847919..871158, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276807.1 (188059381..188082826)

NW_003613589.1Genomic Context describing neighboring genes Neighboring gene ELL associated factor 1 Neighboring gene low-density lipoprotein receptor-related protein 10-like Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene ankyrin repeat domain 28 Neighboring gene biotinidase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 15
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613589.1 Reference CriGri_1.0 Primary Assembly

    Range
    847919..871158 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003495298.5 → XP_003495346.1  polypeptide N-acetylgalactosaminyltransferase 15

    See identical proteins and their annotated locations for XP_003495346.1

    UniProtKB/TrEMBL
    A0A8C2QKQ7, A0A9J7J2X8
    Conserved Domains (4) summary
    cd02510
    Location:196 → 495
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:509 → 632
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:507 → 630
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    pfam13641
    Location:193 → 449
    Glyco_tranf_2_3; Glycosyltransferase like family 2

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276807.1 Alternate CriGri-PICRH-1.0

    Range
    188059381..188082826
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027389519.2 → XP_027245320.1  polypeptide N-acetylgalactosaminyltransferase 15

    UniProtKB/TrEMBL
    A0A8C2QKQ7, A0A9J7J2X8
    Related
    ENSCGRP00015028271.1, ENSCGRT00015034622.2
Nucleotide Protein Strain
Heading Accession and Version

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