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Galnt18 polypeptide N-acetylgalactosaminyltransferase 18 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100767393, updated on 8-Mar-2024

Summary

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Gene symbol
Galnt18
Gene description
polypeptide N-acetylgalactosaminyltransferase 18
Locus tag
I79_015302
See related
Ensembl:ENSCGRG00015006806
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
12
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614409.1 (61342..369330, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (88901479..89210813)

NW_003614409.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L39-like Neighboring gene uncharacterized LOC107978866

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 18
Names
Putative polypeptide N-acetylgalactosaminyltransferase-like protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614409.1 Reference CriGri_1.0 Primary Assembly

    Range
    61342..369330 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035459262.1 → XP_035315153.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X1

    Conserved Domains (2) summary
    cd02510
    Location:168 → 469
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:482 → 609
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    88901479..89210813
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035441322.1 → XP_035297213.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X2

    UniProtKB/TrEMBL
    A0A8C2MF70
    Related
    ENSCGRP00015039947.1, ENSCGRT00015066926.1
    Conserved Domains (2) summary
    cd02510
    Location:157 → 473
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:486 → 613
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

  2. XM_035441323.1 → XP_035297214.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X3

    UniProtKB/TrEMBL
    A0A9J7GR89
    Related
    ENSCGRP00015008802.2, ENSCGRT00015010812.2
    Conserved Domains (2) summary
    cd02510
    Location:157 → 458
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:471 → 598
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

  3. XM_035441324.1 → XP_035297215.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X4

    UniProtKB/TrEMBL
    A0A9J7GQL9
    Conserved Domains (2) summary
    cd00161
    Location:409 → 536
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    cl11394
    Location:157 → 396
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein Strain
Heading Accession and Version

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