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Ppox protoporphyrinogen oxidase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100767777, updated on 8-Mar-2024

Summary

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Gene symbol
Ppox
Gene description
protoporphyrinogen oxidase
See related
Ensembl:ENSCGRG00015017575
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
14
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614301.1 (225391..229770)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 5 NC_048598.1 (21595639..21600018)

NW_003614301.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-fold modifier conjugating enzyme 1 Neighboring gene ubiquitin specific peptidase 21 Neighboring gene beta-1,4-galactosyltransferase 3 Neighboring gene uncharacterized LOC103164125

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxygen-dependent protoporphyrinogen oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heme biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protoporphyrinogen oxidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614301.1 Reference CriGri_1.0 Primary Assembly

    Range
    225391..229770
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035458697.1 → XP_035314588.1  protoporphyrinogen oxidase isoform X1

    UniProtKB/TrEMBL
    G3HU16
    Conserved Domains (1) summary
    TIGR00562
    Location:3 → 471
    proto_IX_ox; protoporphyrinogen oxidase

  2. XM_007647398.4 → XP_007645588.1  protoporphyrinogen oxidase isoform X1

    See identical proteins and their annotated locations for XP_007645588.1

    UniProtKB/TrEMBL
    G3HU16
    Conserved Domains (1) summary
    TIGR00562
    Location:3 → 471
    proto_IX_ox; protoporphyrinogen oxidase

  3. XM_007647397.4 → XP_007645587.1  protoporphyrinogen oxidase isoform X1

    See identical proteins and their annotated locations for XP_007645587.1

    UniProtKB/TrEMBL
    G3HU16
    Conserved Domains (1) summary
    TIGR00562
    Location:3 → 471
    proto_IX_ox; protoporphyrinogen oxidase

  4. XM_035458698.1 → XP_035314589.1  protoporphyrinogen oxidase isoform X1

    UniProtKB/TrEMBL
    G3HU16
    Conserved Domains (1) summary
    TIGR00562
    Location:3 → 471
    proto_IX_ox; protoporphyrinogen oxidase

  5. XM_007647400.4 → XP_007645590.1  protoporphyrinogen oxidase isoform X2

    See identical proteins and their annotated locations for XP_007645590.1

    UniProtKB/TrEMBL
    A0A9J7JTJ7
    Conserved Domains (2) summary
    TIGR00562
    Location:7 → 403
    proto_IX_ox; protoporphyrinogen oxidase
    cl21454
    Location:159 → 293
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

  6. XM_027439660.1 → XP_027295461.1  protoporphyrinogen oxidase isoform X3

    UniProtKB/TrEMBL
    A0A9J7G4V1

  7. XM_027439661.1 → XP_027295462.1  protoporphyrinogen oxidase isoform X4

    UniProtKB/TrEMBL
    A0A9J7G4Y4

  8. XM_003506863.2 → XP_003506911.1  protoporphyrinogen oxidase isoform X1

    See identical proteins and their annotated locations for XP_003506911.1

    UniProtKB/TrEMBL
    G3HU16
    Conserved Domains (1) summary
    TIGR00562
    Location:3 → 471
    proto_IX_ox; protoporphyrinogen oxidase

  9. XM_027439663.2 → XP_027295464.1  protoporphyrinogen oxidase isoform X5

    UniProtKB/TrEMBL
    A0A9J7G7C1

  10. XM_027439662.1 → XP_027295463.1  protoporphyrinogen oxidase isoform X5

    UniProtKB/TrEMBL
    A0A9J7G7C1

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048598.1 Alternate CriGri-PICRH-1.0

    Range
    21595639..21600018
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035445529.1 → XP_035301420.1  protoporphyrinogen oxidase isoform X1

    UniProtKB/TrEMBL
    G3HU16
    Conserved Domains (1) summary
    TIGR00562
    Location:3 → 471
    proto_IX_ox; protoporphyrinogen oxidase

  2. XM_027419012.2 → XP_027274813.1  protoporphyrinogen oxidase isoform X1

    UniProtKB/TrEMBL
    G3HU16
    Conserved Domains (1) summary
    TIGR00562
    Location:3 → 471
    proto_IX_ox; protoporphyrinogen oxidase

  3. XM_027419011.2 → XP_027274812.1  protoporphyrinogen oxidase isoform X1

    UniProtKB/TrEMBL
    G3HU16
    Related
    ENSCGRP00015023119.1, ENSCGRT00015028351.2
    Conserved Domains (1) summary
    TIGR00562
    Location:3 → 471
    proto_IX_ox; protoporphyrinogen oxidase

  4. XM_035445530.1 → XP_035301421.1  protoporphyrinogen oxidase isoform X1

    UniProtKB/TrEMBL
    G3HU16
    Conserved Domains (1) summary
    TIGR00562
    Location:3 → 471
    proto_IX_ox; protoporphyrinogen oxidase

  5. XM_027419013.2 → XP_027274814.1  protoporphyrinogen oxidase isoform X2

    UniProtKB/TrEMBL
    A0A9J7JTJ7

  6. XM_027419014.1 → XP_027274815.1  protoporphyrinogen oxidase isoform X3

    UniProtKB/TrEMBL
    A0A9J7G4V1

  7. XM_027419015.1 → XP_027274816.1  protoporphyrinogen oxidase isoform X4

    UniProtKB/TrEMBL
    A0A9J7G4Y4

  8. XM_027419010.1 → XP_027274811.1  protoporphyrinogen oxidase isoform X1

    UniProtKB/TrEMBL
    G3HU16
    Conserved Domains (1) summary
    TIGR00562
    Location:3 → 471
    proto_IX_ox; protoporphyrinogen oxidase

  9. XM_027419017.2 → XP_027274818.1  protoporphyrinogen oxidase isoform X5

    UniProtKB/TrEMBL
    A0A9J7G7C1

  10. XM_027419016.1 → XP_027274817.1  protoporphyrinogen oxidase isoform X5

    UniProtKB/TrEMBL
    A0A9J7G7C1
Nucleotide Protein Strain
Heading Accession and Version

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