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Chsy3 chondroitin sulfate synthase 3 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100767985, updated on 8-Mar-2024

Summary

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Gene symbol
Chsy3
Gene description
chondroitin sulfate synthase 3
Locus tag
I79_017044
See related
Ensembl:ENSCGRG00015008709
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614618.1 (29121..290914)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (179753750..179975951, complement)

NW_003614618.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L27 Neighboring gene elongation factor 1-alpha 1-like Neighboring gene uncharacterized LOC107980317

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate synthase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614618.1 Reference CriGri_1.0 Primary Assembly

    Range
    29121..290914
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027441155.2 → XP_027296956.2  chondroitin sulfate synthase 3 isoform X1

    Conserved Domains (2) summary
    pfam05679
    Location:113 → 649
    CHGN; Chondroitin N-acetylgalactosaminyltransferase
    cl21608
    Location:33 → 183
    Galactosyl_T; Galactosyltransferase

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    179753750..179975951 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027400946.2 → XP_027256747.1  chondroitin sulfate synthase 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C2LSM8, A0A9J7FCE7
    Related
    ENSCGRP00015011306.1, ENSCGRT00015013861.2
Nucleotide Protein Strain
Heading Accession and Version

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