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Tdo2 tryptophan 2,3-dioxygenase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100768126, updated on 8-Mar-2024

Summary

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Gene symbol
Tdo2
Gene description
tryptophan 2,3-dioxygenase
Locus tag
I79_005559
See related
Ensembl:ENSCGRG00015023520
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613739.1 (122355..135628, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (72358609..72371885)

NW_003613739.1Genomic Context describing neighboring genes Neighboring gene cathepsin O Neighboring gene acid sensing ion channel subunit family member 5 Neighboring gene guanylate cyclase 1 soluble subunit beta 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tryptophan 2,3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tryptophan catabolic process to acetyl-CoA IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tryptophan catabolic process to kynurenine IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tryptophan 2,3-dioxygenase
Names
tryptophan 2,3-dioxygenase-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613739.1 Reference CriGri_1.0 Primary Assembly

    Range
    122355..135628 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003499464.3 → XP_003499512.1  tryptophan 2,3-dioxygenase

    See identical proteins and their annotated locations for XP_003499512.1

    UniProtKB/TrEMBL
    A0A061IR51
    Conserved Domains (1) summary
    pfam03301
    Location:29 → 373
    Trp_dioxygenase; Tryptophan 2,3-dioxygenase

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    72358609..72371885
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027392926.2 → XP_027248727.1  tryptophan 2,3-dioxygenase

    UniProtKB/TrEMBL
    A0A061IR51
    Related
    ENSCGRP00015031220.1, ENSCGRT00015038145.2
Nucleotide Protein Strain
Heading Accession and Version

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