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Gpt2 glutamic--pyruvic transaminase 2 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100768176, updated on 8-Mar-2024

Summary

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Gene symbol
Gpt2
Gene description
glutamic--pyruvic transaminase 2
See related
Ensembl:ENSCGRG00015018851
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Gpt2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003615087.1 (279696..312301)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (161188540..161221243)

NW_003615087.1Genomic Context describing neighboring genes Neighboring gene myosin light chain kinase 3 Neighboring gene chromosome 3 C16orf87 homolog Neighboring gene DnaJ heat shock protein family (Hsp40) member A2 Neighboring gene transfer RNA glutamic acid (anticodon CUC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-alanine:2-oxoglutarate aminotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alanine aminotransferase 2
Names
Alanine aminotransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003615087.1 Reference CriGri_1.0 Primary Assembly

    Range
    279696..312301
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007651872.2 → XP_007650062.2  alanine aminotransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A061IBG9, G3I8H6
    Conserved Domains (1) summary
    PTZ00377
    Location:48 → 522
    PTZ00377; alanine aminotransferase; Provisional

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    161188540..161221243
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027406303.2 → XP_027262104.1  alanine aminotransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A061IBG9, G3I8H6
    Related
    ENSCGRP00015050643.1, ENSCGRT00015058551.1
    Conserved Domains (1) summary
    PTZ00377
    Location:48 → 522
    PTZ00377; alanine aminotransferase; Provisional

  2. XM_027406305.2 → XP_027262106.1  alanine aminotransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A061IBG9, G3I8H6
    Related
    ENSCGRP00015024825.2, ENSCGRT00015030444.2
    Conserved Domains (1) summary
    PTZ00377
    Location:48 → 522
    PTZ00377; alanine aminotransferase; Provisional

  3. XM_027406302.2 → XP_027262103.2  alanine aminotransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A061IBG9, G3I8H6
    Related
    ENSCGRP00015040293.1, ENSCGRT00015072127.1
    Conserved Domains (1) summary
    PTZ00377
    Location:48 → 522
    PTZ00377; alanine aminotransferase; Provisional
Nucleotide Protein Strain
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